dom e760b12961 refactor: split cim10_extractor → bio_normals, bio_extraction, diagnostic_extraction, validation_pipeline ...

Découpe le monolithe cim10_extractor.py (1356L) en 4 modules spécialisés :
- bio_normals.py : constante BIO_NORMALS + _is_abnormal() (feuille)
- bio_extraction.py : extraction biologie structurée
- diagnostic_extraction.py : extraction DP/DAS/actes CCAM
- validation_pipeline.py : validation CIM-10/CCAM + règles métier

Le cim10_extractor.py reste orchestrateur (~450L) avec re-exports
backward-compat. Imports mis à jour dans clinical_context, rag_search,
fusion. 748 tests passent.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

2026-02-20 10:06:18 +01:00

config

feat: qualité DP Phase 2 — filtre OCR étendu, abréviations médicales, promotion DAS→DP

2026-02-20 08:37:10 +01:00

data

fix: garde-fous qualité Phase 1 — codes invalides et raisonnements vides

2026-02-20 07:53:43 +01:00

docs

feat: architecture multi-modèles LLM + quality engine + benchmark

2026-02-20 00:21:09 +01:00

scripts

feat: parallélisation pipeline --workers N (ThreadPoolExecutor)

2026-02-20 01:30:51 +01:00

src

refactor: split cim10_extractor → bio_normals, bio_extraction, diagnostic_extraction, validation_pipeline

2026-02-20 10:06:18 +01:00

tests

feat: infrastructure — pyproject.toml, requirements-dev, conftest, pytest-cov

2026-02-20 10:06:11 +01:00

.env.example

feat: configuration externalisée via .env + audit requirements

2026-02-13 19:46:33 +01:00

.gitignore

feat: configuration externalisée via .env + audit requirements

2026-02-13 19:46:33 +01:00

analyze_pdfs.py

feat: pipeline T2A - anonymisation, extraction CIM-10 et intégration edsnlp

2026-02-10 15:24:12 +01:00

batch_50.sh

feat: architecture multi-modèles LLM + quality engine + benchmark

2026-02-20 00:21:09 +01:00

pyproject.toml

feat: infrastructure — pyproject.toml, requirements-dev, conftest, pytest-cov

2026-02-20 10:06:11 +01:00

rapport_analyse_pdfs.md

feat: pipeline T2A - anonymisation, extraction CIM-10 et intégration edsnlp

2026-02-10 15:24:12 +01:00

requirements-dev.txt

feat: infrastructure — pyproject.toml, requirements-dev, conftest, pytest-cov

2026-02-20 10:06:11 +01:00

requirements.txt

feat: architecture multi-modèles LLM + quality engine + benchmark

2026-02-20 00:21:09 +01:00

run.sh

feat: architecture multi-modèles LLM + quality engine + benchmark

2026-02-20 00:21:09 +01:00

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