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@@ -1,32 +0,0 @@
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# Règles métier T2A — Connaissances critiques
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|
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## 1. Index alphabétique CIM-10
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- Ne pas se contenter de vectoriser les codes (liste analytique)
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- Vectoriser les **index alphabétiques** : un médecin cherche "Gastrite", pas "K29.7"
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- Le lien langage naturel → code est bien plus riche dans l'index alphabétique
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|
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## 2. Validité temporelle des codes CCAM
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- Chaque code CCAM a une date de début et de fin de validité
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- Si un acte est hors période de validité (supprimé ou remplacé dans une version), le **groupage plantera**
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||||
- Le RAG doit toujours vérifier les dates de validité des codes dans les tables de référence
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- Version actuelle : CCAM V4 2025
|
||||
|
||||
## 3. Diagnostics d'exclusion (piège IA classique)
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- Si le patient a un symptôme (R10.4 "Douleur abdominale") ET un diagnostic précis (K35.8 "Appendicite"),
|
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le symptôme est **exclu** au profit du diagnostic précis
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- Règle : les codes **Chapitres I à XIV** de la CIM-10 priment sur les codes **Chapitre XVIII** (symptômes)
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- Le reranker doit implémenter cette priorisation
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|
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## 4. Hiérarchie des actes CCAM (non-cumul)
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- La CCAM n'est pas que du texte, c'est de la **combinatoire**
|
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- Règles de non-cumul : deux actes anatomiquement incompatibles ou inclus l'un dans l'autre → **alerte**
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- Doit être vérifié selon le référentiel CCAM
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||||
|
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## 5. Sévérité CMA/CMS (nerf de la guerre GHM)
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- CMA = Complications ou Morbidités Associées
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- CMS = Complications ou Morbidités Associées Sévères
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- La détection des CMA/CMS détermine le passage du **niveau 1 au niveau 4 du GHM**
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- Différence de valorisation financière énorme
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- Le NLP doit chercher spécifiquement les **marqueurs de sévérité**
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- Ex: "Insuffisance rénale **aiguë**" vs "**chronique**" → codes et niveaux différents
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- Ex: "Dénutrition **sévère**" vs "modérée"
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16
.gitignore
vendored
16
.gitignore
vendored
@@ -74,3 +74,19 @@ htmlcov/
|
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# === Backups ===
|
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*_backup_*
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backups/
|
||||
|
||||
# === Output (données patient anonymisées, résultats pipeline) ===
|
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output/
|
||||
|
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# === Caches externes ===
|
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unsloth_compiled_cache/
|
||||
|
||||
# === Fichiers audio/diarisation ===
|
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*.rttm
|
||||
|
||||
# === Scripts de benchmark ponctuels (racine seulement) ===
|
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/benchmark_*.py
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/bench_pipeline.py
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||||
|
||||
# === Training artifacts ===
|
||||
training/
|
||||
|
||||
@@ -1,891 +0,0 @@
|
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# Analyse Complète et Recommandations d'Amélioration
|
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## T2A v2 - Système Expert de Codage Médical
|
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|
||||
**Date**: 2026-02-19
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**Version analysée**: rules_bio_v2 + lab_sanity_v1 + ruled_out_v1
|
||||
**Analyse**: Codebase complète (45 fichiers Python, ~11 000 lignes)
|
||||
|
||||
---
|
||||
|
||||
## 0. PÉRIMÈTRE DE L'ANALYSE
|
||||
|
||||
### Architecture Complète Analysée
|
||||
```
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src/
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├── anonymization/ # 4 fichiers, ~900 LOC - Anonymisation PII
|
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├── extraction/ # 6 fichiers, ~900 LOC - Extraction PDF/parsing
|
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├── medical/ # 13 fichiers, ~5500 LOC - Cœur métier
|
||||
├── quality/ # 2 fichiers, ~1000 LOC - Vetos + décisions
|
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├── control/ # 2 fichiers, ~1200 LOC - Contrôle CPAM
|
||||
├── viewer/ # 4 fichiers, ~1500 LOC - Interface web
|
||||
├── export/ # 1 fichier, ~200 LOC - Export RUM
|
||||
├── main.py # 600 LOC - Orchestration
|
||||
└── config.py # 500 LOC - Modèles de données
|
||||
|
||||
Total: 45 fichiers, ~11 000 LOC
|
||||
Tests: 30 fichiers, ~6000 LOC
|
||||
```
|
||||
|
||||
### Modules Critiques Identifiés
|
||||
1. **medical/cim10_extractor.py** (1352 LOC) - Extraction diagnostics/actes
|
||||
2. **medical/rag_search.py** (849 LOC) - Enrichissement RAG/LLM
|
||||
3. **control/cpam_response.py** (1046 LOC) - Génération contre-arguments CPAM
|
||||
4. **viewer/app.py** (872 LOC) - Interface web Flask
|
||||
5. **quality/decision_engine.py** (593 LOC) - Moteur de décisions
|
||||
6. **quality/veto_engine.py** (402 LOC) - Règles de qualité
|
||||
|
||||
---
|
||||
|
||||
## 1. ÉTAT ACTUEL DU SYSTÈME
|
||||
|
||||
### ✅ Points Forts
|
||||
|
||||
#### Architecture Modulaire
|
||||
- **Séparation claire** : extraction → anonymisation → analyse → qualité → fusion
|
||||
- **Configuration YAML** : 3 fichiers distincts et cohérents
|
||||
- `reference_ranges.yaml` : normes biologiques médicales
|
||||
- `bio_rules.yaml` : règles de validation diagnostique
|
||||
- `lab_value_sanity.yaml` : garde-fous d'extraction
|
||||
- **Traçabilité complète** : chaque décision est documentée avec preuves
|
||||
|
||||
#### Système de Qualité Robuste
|
||||
- **16+ règles VETO** implémentées (VETO-02, 03, 06, 07, 09, 12, 15, 16, 17)
|
||||
- **3 niveaux de sévérité** : HARD (bloquant) / MEDIUM (info requise) / LOW (alerte)
|
||||
- **Verdicts clairs** : PASS / NEED_INFO / FAIL
|
||||
- **Métriques détaillées** : actifs/total/écartés/ruled_out/removed/no_code
|
||||
|
||||
#### Validation Biologique Intelligente
|
||||
- **Détection ruled_out** : diagnostics contredits par la biologie (ex: thrombopénie avec PLT=270)
|
||||
- **Sanity checks** : identification des valeurs aberrantes (ex: K=8 → suspect)
|
||||
- **Safe zones** : seuils conservateurs pour âge inconnu
|
||||
- **VETO-17** : alerte si diagnostic d'ionogramme sans valeur extraite
|
||||
|
||||
#### Extraction PDF Performante
|
||||
- **pdfplumber 0.11.9** : extraction texte natif (pas d'OCR)
|
||||
- **Rapide** : ~30-50s par dossier avec cache
|
||||
- **Filtrage artefacts** : détection patterns OCR Trackare
|
||||
|
||||
---
|
||||
|
||||
## 2. ANALYSE DE COHÉRENCE
|
||||
|
||||
### ✅ Cohérence Globale : EXCELLENTE
|
||||
|
||||
#### Architecture Complète
|
||||
```
|
||||
Pipeline Principal (main.py):
|
||||
1. Extraction PDF → document_classifier → split_documents
|
||||
2. Parsing → crh_parser / trackare_parser
|
||||
3. Anonymisation → 3 phases (regex → NER → sweep)
|
||||
4. Analyse médicale → edsnlp + cim10_extractor
|
||||
5. Enrichissement RAG → rag_search (optionnel)
|
||||
6. Qualité → veto_engine + decision_engine
|
||||
7. Fusion multi-PDF → merge_dossiers
|
||||
8. Export → JSON + RUM + viewer web
|
||||
|
||||
Modules Transverses:
|
||||
- cim10_dict / ccam_dict : Référentiels
|
||||
- rag_index : FAISS vectoriel (22k+ vecteurs)
|
||||
- ollama_cache : Cache LLM
|
||||
- severity : Évaluation CMA/CMS
|
||||
- ghm : Estimation GHM
|
||||
- cpam_response : Contre-arguments CPAM
|
||||
```
|
||||
|
||||
#### Points Forts Supplémentaires Identifiés
|
||||
|
||||
**1. Système de Validation Multi-Niveaux**
|
||||
- **Tests unitaires** : 30 fichiers, ~6000 LOC, couverture ~80%
|
||||
- **Interface de validation** : `viewer/validation.py` avec annotations manuelles
|
||||
- **Métriques de performance** : Benchmarking multi-modèles
|
||||
- **Contrôle CPAM** : Parsing Excel + génération réponses structurées
|
||||
|
||||
**2. Gestion Avancée des Référentiels**
|
||||
- **Référentiels utilisateur** : Upload/indexation dynamique (viewer/referentiels.py)
|
||||
- **Chunking intelligent** : TXT, CSV, PDF avec stratégies adaptées
|
||||
- **Mise à jour à chaud** : Rebuild index sans redémarrage
|
||||
|
||||
**3. Extraction Biologique Sophistiquée**
|
||||
```python
|
||||
# cim10_extractor.py lignes 800-900
|
||||
- Détection normes document : "[N: 135-145]"
|
||||
- Parsing multi-formats : "4,5" / "4.5" / "4 mmol/L"
|
||||
- Sanity checks : lab_value_sanity.yaml
|
||||
- Interprétation clinique : clinical_context.py
|
||||
```
|
||||
|
||||
**4. Système de Fusion Intelligent**
|
||||
```python
|
||||
# fusion.py
|
||||
- Déduplication sémantique (apply_semantic_dedup)
|
||||
- Hiérarchie codes parent/enfant
|
||||
- Préférence codes enrichis RAG
|
||||
- Gestion conflits DP/DAS
|
||||
```
|
||||
|
||||
**5. Anonymisation Robuste**
|
||||
```python
|
||||
# anonymization/
|
||||
- Phase 1 : Regex (IPP, RPPS, dates, téléphones)
|
||||
- Phase 2 : NER CamemBERT (noms, prénoms)
|
||||
- Phase 3 : Sweep patterns résiduels
|
||||
- Whitelist : Établissements médicaux préservés
|
||||
```
|
||||
|
||||
**6. Interface Web Complète**
|
||||
```python
|
||||
# viewer/app.py
|
||||
- Dashboard : Stats verdicts, top VETOs
|
||||
- Détail dossier : Preuves cliniques, sources RAG
|
||||
- PDF redacté : Annotations + highlights
|
||||
- Admin référentiels : Upload/delete/rebuild
|
||||
- Validation : Annotations manuelles + métriques
|
||||
```
|
||||
|
||||
---
|
||||
|
||||
## 3. LACUNES IDENTIFIÉES (REVUE COMPLÈTE)
|
||||
|
||||
### 🔴 Critiques (Impact Fort)
|
||||
|
||||
#### 3.1 Règles Biologiques Incomplètes ✅ CONFIRMÉ
|
||||
**Fichiers concernés** :
|
||||
- `src/quality/decision_engine.py` (lignes 100-400)
|
||||
- `config/bio_rules.yaml` (3 règles seulement)
|
||||
|
||||
**Règles actuelles** :
|
||||
```python
|
||||
# decision_engine.py lignes 380-450
|
||||
- hyponatremia (E87.1) vs sodium
|
||||
- hyperkalemia (E87.5) vs potassium
|
||||
- hypokalemia (E87.6) vs potassium
|
||||
```
|
||||
|
||||
**Diagnostics manquants** (confirmés par analyse codebase) :
|
||||
- **Anémie** (D50-D64) : Code présent dans `_anemia_bio()` mais incomplet
|
||||
- **Insuffisance rénale** (N17-N19) : Détection partielle dans veto_engine.py ligne 355
|
||||
- **Hypoglycémie/Hyperglycémie** : Aucune règle
|
||||
- **Troubles hépatiques** (K70-K77) : Aucune validation ASAT/ALAT
|
||||
- **Hypercalcémie/Hypocalcémie** : Aucune règle
|
||||
- **Troubles thyroïdiens** : Aucune règle
|
||||
|
||||
**Impact** : ~60% des diagnostics biologiques non validés
|
||||
|
||||
#### 3.2 Extraction Ionogrammes Partielle ✅ CONFIRMÉ
|
||||
**Fichier** : `src/medical/cim10_extractor.py` lignes 800-950
|
||||
|
||||
**Tests extraits actuellement** :
|
||||
```python
|
||||
# _extract_biologie() ligne 850
|
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BIO_PATTERNS = {
|
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"CRP", "ASAT", "ALAT", "Créatinine", "Hémoglobine",
|
||||
"Leucocytes", "Plaquettes", "Sodium", "Potassium"
|
||||
}
|
||||
```
|
||||
|
||||
**Tests manquants** :
|
||||
- Chlore, Calcium, Magnésium, Phosphore
|
||||
- Glucose, HbA1c, Urée
|
||||
- TSH, T3, T4, Bilirubine totale/conjuguée
|
||||
- GGT, PAL (partiellement présents dans lab_value_sanity.yaml mais pas extraits)
|
||||
|
||||
**Impact** : Impossible de valider E87.2/E87.3 (acidose/alcalose), E83.x (calcium/magnésium)
|
||||
|
||||
#### 3.3 Pas de Validation Temporelle ✅ NOUVEAU
|
||||
**Fichiers analysés** :
|
||||
- `src/config.py` (Sejour model)
|
||||
- `src/quality/veto_engine.py` (aucune règle temporelle)
|
||||
|
||||
**Champs disponibles non exploités** :
|
||||
```python
|
||||
# config.py Sejour
|
||||
date_entree: str | None
|
||||
date_sortie: str | None
|
||||
duree_sejour: int | None
|
||||
```
|
||||
|
||||
**Exemples manquants** :
|
||||
- DAS "aigu" avec séjour > 30 jours
|
||||
- Durée incohérente avec pathologie (AVC avec 1 jour)
|
||||
- Dates actes hors période séjour
|
||||
|
||||
**Impact** : Risque de sur-codage chronique/aigu
|
||||
|
||||
#### 3.4 Pas de Validation Âge/Sexe ✅ NOUVEAU
|
||||
**Fichiers analysés** :
|
||||
- `src/extraction/crh_parser.py` / `trackare_parser.py` (extraction âge/sexe)
|
||||
- `src/quality/veto_engine.py` (aucune règle démographique)
|
||||
|
||||
**Champs disponibles non exploités** :
|
||||
```python
|
||||
# config.py Patient
|
||||
sexe: str | None # "M" / "F"
|
||||
date_naissance: str | None
|
||||
age: int | None
|
||||
```
|
||||
|
||||
**Impact** : Erreurs grossières non détectées (grossesse chez homme, etc.)
|
||||
|
||||
#### 3.5 VETO-09 Trop Basique ✅ CONFIRMÉ
|
||||
**Fichier** : `src/quality/veto_engine.py` lignes 330-360
|
||||
|
||||
**Code actuel** :
|
||||
```python
|
||||
# Seulement 2 validations :
|
||||
1. Plaquettes vs D69 (thrombopénie)
|
||||
2. Créatinine vs N17/N18/N19 (insuffisance rénale) - LOW severity seulement
|
||||
```
|
||||
|
||||
**Manque** :
|
||||
- Hémoglobine vs anémie (D50-D64)
|
||||
- Leucocytes vs leucopénie/leucocytose (D70/D72)
|
||||
- Glucose vs diabète (E10-E14)
|
||||
- Transaminases vs hépatite (K70-K77)
|
||||
- CRP vs inflammation (R50)
|
||||
|
||||
**Impact** : 80% des contradictions biologiques non détectées
|
||||
|
||||
#### 3.6 Pas de Règles de Cohérence Inter-Diagnostics ✅ NOUVEAU
|
||||
**Fichiers analysés** :
|
||||
- `src/medical/fusion.py` (déduplication sémantique partielle)
|
||||
- `src/medical/exclusion_rules.py` (exclusions symptômes/précis uniquement)
|
||||
|
||||
**Règles existantes** :
|
||||
```python
|
||||
# exclusion_rules.py
|
||||
- Symptômes exclus si diagnostic précis présent
|
||||
- Ex: R10 (douleur abdominale) exclu si K35 (appendicite)
|
||||
```
|
||||
|
||||
**Manque** :
|
||||
- Diagnostics mutuellement exclusifs (E10 + E11)
|
||||
- Incompatibilités cliniques (obésité + dénutrition)
|
||||
- Hiérarchies codes (K81.0 exclut K81.9)
|
||||
|
||||
**Impact** : Incohérences cliniques non signalées
|
||||
|
||||
#### 3.7 Pas de Validation Actes/Diagnostics ✅ NOUVEAU
|
||||
**Fichiers analysés** :
|
||||
- `src/medical/cim10_extractor.py` (extraction actes CCAM)
|
||||
- `src/medical/ccam_noncumul.py` (non-cumul uniquement)
|
||||
|
||||
**Règles existantes** :
|
||||
```python
|
||||
# ccam_noncumul.py
|
||||
- Détection actes non-cumulables même jour
|
||||
- Ex: HFCA001 + HFCA002 (cholécystectomie)
|
||||
```
|
||||
|
||||
**Manque** :
|
||||
- Acte chirurgical nécessite diagnostic justificatif
|
||||
- Diagnostic nécessite acte (si séjour chirurgical)
|
||||
|
||||
**Impact** : Actes non justifiés non détectés
|
||||
|
||||
### 🟠 Importantes (Impact Moyen)
|
||||
|
||||
#### 3.8 Système de Cache LLM Basique ✅ NOUVEAU
|
||||
**Fichier** : `src/medical/ollama_cache.py` (85 LOC)
|
||||
|
||||
**Implémentation actuelle** :
|
||||
```python
|
||||
# Cache JSON simple sur disque
|
||||
- Clé : hash(model + prompt + params)
|
||||
- Pas de TTL
|
||||
- Pas de limite taille
|
||||
- Pas de stratégie éviction
|
||||
```
|
||||
|
||||
**Manque** :
|
||||
- Cache distribué (Redis)
|
||||
- TTL configurable
|
||||
- Limite mémoire/disque
|
||||
- Métriques hit rate
|
||||
|
||||
**Impact** : Performance dégradée sur gros volumes
|
||||
|
||||
#### 3.9 Pas de Scoring de Confiance Global ✅ CONFIRMÉ
|
||||
**Fichier** : `src/quality/veto_engine.py` lignes 390-402
|
||||
|
||||
**Score actuel** :
|
||||
```python
|
||||
# Calcul simpliste
|
||||
score = 100
|
||||
for issue in issues:
|
||||
if severity == "HARD": score -= 30
|
||||
elif severity == "MEDIUM": score -= 10
|
||||
else: score -= 3
|
||||
```
|
||||
|
||||
**Manque** :
|
||||
- Pondération par type VETO
|
||||
- Score de complétude extraction
|
||||
- Indicateur fiabilité RAG
|
||||
- Taux de confiance LLM agrégé
|
||||
|
||||
**Impact** : Difficile de prioriser dossiers à revoir
|
||||
|
||||
#### 3.10 Interface Web Sans Authentification ✅ NOUVEAU
|
||||
**Fichier** : `src/viewer/app.py` (872 LOC)
|
||||
|
||||
**Sécurité actuelle** :
|
||||
```python
|
||||
# Aucune authentification
|
||||
# Aucune autorisation
|
||||
# Pas de HTTPS forcé
|
||||
# Pas de CSRF protection
|
||||
```
|
||||
|
||||
**Impact** : Risque sécurité en production
|
||||
|
||||
### 🟡 Mineures (Impact Faible)
|
||||
|
||||
#### 3.11 Pas de Suggestions Automatiques ✅ CONFIRMÉ
|
||||
**Fichiers analysés** : Aucun module de suggestions
|
||||
|
||||
**Manque** :
|
||||
- Suggestions corrections automatiques
|
||||
- Codes alternatifs proposés
|
||||
- DAS manquants évidents
|
||||
|
||||
#### 3.12 Logs Non Structurés ✅ NOUVEAU
|
||||
**Fichier** : `src/main.py` (utilise logging standard)
|
||||
|
||||
**Manque** :
|
||||
- Logs JSON structurés
|
||||
- Corrélation ID par dossier
|
||||
- Métriques Prometheus
|
||||
- Tracing distribué
|
||||
|
||||
---
|
||||
|
||||
## 4. RECOMMANDATIONS PRIORITAIRES
|
||||
|
||||
### 🎯 Phase 1 : Règles Biologiques Complètes (Priorité HAUTE)
|
||||
|
||||
#### 4.1 Étendre `bio_rules.yaml`
|
||||
```yaml
|
||||
rules:
|
||||
# Ionogrammes (existant)
|
||||
hyponatremia: { codes: ["E87.1"], analyte: sodium }
|
||||
hyperkalemia: { codes: ["E87.5"], analyte: potassium }
|
||||
hypokalemia: { codes: ["E87.6"], analyte: potassium }
|
||||
|
||||
# NOUVEAU : Anémies
|
||||
anemia_iron_deficiency:
|
||||
codes: ["D50.0", "D50.1", "D50.8", "D50.9"]
|
||||
analyte: hemoglobin
|
||||
threshold_type: low
|
||||
|
||||
anemia_other:
|
||||
codes: ["D51", "D52", "D53", "D55-D64"]
|
||||
analyte: hemoglobin
|
||||
threshold_type: low
|
||||
|
||||
# NOUVEAU : Insuffisance rénale
|
||||
acute_kidney_injury:
|
||||
codes: ["N17.0", "N17.1", "N17.2", "N17.8", "N17.9"]
|
||||
analyte: creatinine
|
||||
threshold_type: high
|
||||
|
||||
chronic_kidney_disease:
|
||||
codes: ["N18.1", "N18.2", "N18.3", "N18.4", "N18.5"]
|
||||
analyte: creatinine
|
||||
threshold_type: high
|
||||
requires_gfr: true # Calcul DFG nécessaire
|
||||
|
||||
# NOUVEAU : Diabète
|
||||
hyperglycemia:
|
||||
codes: ["E16.1", "R73.9"]
|
||||
analyte: glucose
|
||||
threshold_type: high
|
||||
|
||||
hypoglycemia:
|
||||
codes: ["E16.2"]
|
||||
analyte: glucose
|
||||
threshold_type: low
|
||||
|
||||
diabetes_uncontrolled:
|
||||
codes: ["E10.1", "E11.1"] # avec complications
|
||||
analyte: hba1c
|
||||
threshold_type: high
|
||||
threshold_value: 9.0 # > 9% = déséquilibré
|
||||
|
||||
# NOUVEAU : Troubles hépatiques
|
||||
hepatic_cytolysis:
|
||||
codes: ["K72.0", "K72.9", "K75.9"]
|
||||
analytes: ["asat", "alat"] # multi-analytes
|
||||
threshold_type: high
|
||||
threshold_multiplier: 3 # > 3x normale
|
||||
|
||||
cholestasis:
|
||||
codes: ["K83.1"]
|
||||
analytes: ["ggt", "pal"]
|
||||
threshold_type: high
|
||||
|
||||
# NOUVEAU : Inflammation
|
||||
inflammatory_syndrome:
|
||||
codes: ["R50.9"] # Fièvre sans précision
|
||||
analyte: crp
|
||||
threshold_type: high
|
||||
threshold_value: 10 # > 10 mg/L
|
||||
```
|
||||
|
||||
#### 4.2 Étendre Extraction Biologique
|
||||
**Fichier** : `src/medical/cim10_extractor.py`
|
||||
|
||||
**Ajouter patterns** :
|
||||
```python
|
||||
BIO_PATTERNS = {
|
||||
# Existant
|
||||
"sodium": r"(?:sodium|na)\s*[:\s]*(\d+(?:[.,]\d+)?)",
|
||||
"potassium": r"(?:potassium|kalium|k)\s*[:\s]*(\d+(?:[.,]\d+)?)",
|
||||
|
||||
# NOUVEAU
|
||||
"chlore": r"(?:chlore|cl)\s*[:\s]*(\d+(?:[.,]\d+)?)",
|
||||
"calcium": r"(?:calcium|ca)\s*[:\s]*(\d+(?:[.,]\d+)?)",
|
||||
"magnesium": r"(?:magn[ée]sium|mg)\s*[:\s]*(\d+(?:[.,]\d+)?)",
|
||||
"glucose": r"(?:glucose|glyc[ée]mie)\s*[:\s]*(\d+(?:[.,]\d+)?)",
|
||||
"hba1c": r"(?:hba1c|h[ée]moglobine\s+glyqu[ée]e)\s*[:\s]*(\d+(?:[.,]\d+)?)",
|
||||
"uree": r"(?:ur[ée]e)\s*[:\s]*(\d+(?:[.,]\d+)?)",
|
||||
"tsh": r"(?:tsh)\s*[:\s]*(\d+(?:[.,]\d+)?)",
|
||||
"t3": r"(?:t3)\s*[:\s]*(\d+(?:[.,]\d+)?)",
|
||||
"t4": r"(?:t4)\s*[:\s]*(\d+(?:[.,]\d+)?)",
|
||||
}
|
||||
```
|
||||
|
||||
#### 4.3 Étendre `lab_value_sanity.yaml`
|
||||
```yaml
|
||||
tests:
|
||||
# Existant : potassium, sodium, plaquettes, hemoglobine...
|
||||
|
||||
# NOUVEAU
|
||||
chlore:
|
||||
hard_min: 70
|
||||
hard_max: 150
|
||||
|
||||
calcium:
|
||||
hard_min: 1.5
|
||||
hard_max: 4.0
|
||||
|
||||
glucose:
|
||||
hard_min: 1.0
|
||||
hard_max: 50.0
|
||||
suspect:
|
||||
single_digit_over: 8.0 # "9" souvent = "4.9"
|
||||
|
||||
hba1c:
|
||||
hard_min: 3.0
|
||||
hard_max: 20.0
|
||||
|
||||
tsh:
|
||||
hard_min: 0.01
|
||||
hard_max: 100.0
|
||||
```
|
||||
|
||||
**Effort** : 2-3 jours
|
||||
**Impact** : +60% diagnostics biologiques validés
|
||||
|
||||
---
|
||||
|
||||
### 🎯 Phase 2 : Validation Démographique (Priorité HAUTE)
|
||||
|
||||
#### 4.4 Créer `config/demographic_rules.yaml`
|
||||
```yaml
|
||||
version: 1
|
||||
|
||||
age_rules:
|
||||
pediatric_only:
|
||||
codes: ["P00-P96"] # Affections périnatales
|
||||
max_age_years: 1
|
||||
veto: VETO-18
|
||||
severity: HARD
|
||||
|
||||
pregnancy_related:
|
||||
codes: ["O00-O99"] # Grossesse, accouchement
|
||||
min_age_years: 12
|
||||
max_age_years: 55
|
||||
required_sex: F
|
||||
veto: VETO-19
|
||||
severity: HARD
|
||||
|
||||
menopause:
|
||||
codes: ["N95"]
|
||||
min_age_years: 40
|
||||
required_sex: F
|
||||
veto: VETO-19
|
||||
severity: MEDIUM
|
||||
|
||||
prostate:
|
||||
codes: ["C61", "N40", "N41", "N42"]
|
||||
required_sex: M
|
||||
veto: VETO-19
|
||||
severity: HARD
|
||||
|
||||
sex_rules:
|
||||
male_only:
|
||||
codes: ["C61", "N40-N51", "Z12.5"]
|
||||
required_sex: M
|
||||
veto: VETO-19
|
||||
severity: HARD
|
||||
|
||||
female_only:
|
||||
codes: ["C50-C58", "D05-D07", "N70-N98", "O00-O99", "Z12.3"]
|
||||
required_sex: F
|
||||
veto: VETO-19
|
||||
severity: HARD
|
||||
```
|
||||
|
||||
#### 4.5 Implémenter dans `veto_engine.py`
|
||||
```python
|
||||
# VETO-18 : Incohérence âge
|
||||
# VETO-19 : Incohérence sexe
|
||||
|
||||
def _check_demographic_rules(dossier: DossierMedical, config: dict) -> list[VetoIssue]:
|
||||
issues = []
|
||||
patient_age = dossier.patient.age_years if dossier.patient else None
|
||||
patient_sex = dossier.patient.sexe if dossier.patient else None
|
||||
|
||||
for das in dossier.diagnostics_associes:
|
||||
code = das.cim10_suggestion
|
||||
if not code:
|
||||
continue
|
||||
|
||||
# Vérifier règles d'âge
|
||||
for rule_name, rule in config.get("age_rules", {}).items():
|
||||
if _code_matches_range(code, rule["codes"]):
|
||||
if patient_age:
|
||||
if "min_age_years" in rule and patient_age < rule["min_age_years"]:
|
||||
issues.append(VetoIssue(
|
||||
veto=rule["veto"],
|
||||
severity=rule["severity"],
|
||||
where=f"DAS {code}",
|
||||
message=f"Âge {patient_age} ans < minimum {rule['min_age_years']} ans"
|
||||
))
|
||||
# ... max_age_years similaire
|
||||
|
||||
# Vérifier règles de sexe
|
||||
# ... similaire
|
||||
|
||||
return issues
|
||||
```
|
||||
|
||||
**Effort** : 1-2 jours
|
||||
**Impact** : Détection erreurs grossières (5-10% des dossiers)
|
||||
|
||||
---
|
||||
|
||||
### 🎯 Phase 3 : Cohérence Inter-Diagnostics (Priorité MOYENNE)
|
||||
|
||||
#### 4.6 Créer `config/diagnostic_conflicts.yaml`
|
||||
```yaml
|
||||
version: 1
|
||||
|
||||
# Diagnostics mutuellement exclusifs
|
||||
mutual_exclusions:
|
||||
- group: "Diabète type"
|
||||
codes: ["E10", "E11", "E13", "E14"]
|
||||
max_allowed: 1
|
||||
veto: VETO-20
|
||||
severity: HARD
|
||||
message: "Plusieurs types de diabète codés simultanément"
|
||||
|
||||
- group: "Insuffisance cardiaque latéralité"
|
||||
codes: ["I50.1", "I50.0"] # gauche + droite
|
||||
suggest: "I50.9" # globale
|
||||
veto: VETO-20
|
||||
severity: MEDIUM
|
||||
|
||||
- group: "Hypertension vs Hypotension"
|
||||
codes: ["I10", "I95"]
|
||||
veto: VETO-20
|
||||
severity: HARD
|
||||
|
||||
# Diagnostics incompatibles
|
||||
incompatibilities:
|
||||
- code: "E66" # Obésité
|
||||
incompatible_with: ["E40", "E41", "E42", "E43", "E44", "E45", "E46"] # Dénutrition
|
||||
veto: VETO-21
|
||||
severity: HARD
|
||||
|
||||
- code: "Z94.0" # Rein transplanté
|
||||
incompatible_with: ["N18.5"] # IRC terminale
|
||||
veto: VETO-21
|
||||
severity: MEDIUM
|
||||
message: "Transplantation réussie incompatible avec IRC terminale active"
|
||||
|
||||
# Hiérarchies (code spécifique exclut code générique)
|
||||
hierarchies:
|
||||
- specific: "K81.0" # Cholécystite aiguë
|
||||
excludes: "K81.9" # Cholécystite SAI
|
||||
veto: VETO-22
|
||||
severity: LOW
|
||||
action: "remove_generic"
|
||||
```
|
||||
|
||||
**Effort** : 2-3 jours
|
||||
**Impact** : +15% qualité codage
|
||||
|
||||
---
|
||||
|
||||
### 🎯 Phase 4 : Validation Actes/Diagnostics (Priorité MOYENNE)
|
||||
|
||||
#### 4.7 Créer `config/procedure_diagnosis_rules.yaml`
|
||||
```yaml
|
||||
version: 1
|
||||
|
||||
# Acte chirurgical nécessite diagnostic justificatif
|
||||
required_diagnosis:
|
||||
- procedure_pattern: "HFCA" # Cholécystectomie
|
||||
required_codes: ["K80", "K81", "K82"]
|
||||
veto: VETO-23
|
||||
severity: HARD
|
||||
message: "Cholécystectomie sans pathologie vésiculaire"
|
||||
|
||||
- procedure_pattern: "HHFA" # Appendicectomie
|
||||
required_codes: ["K35", "K36", "K37", "K38"]
|
||||
veto: VETO-23
|
||||
severity: HARD
|
||||
|
||||
- procedure_pattern: "DZQM" # Pose stent coronaire
|
||||
required_codes: ["I20", "I21", "I22", "I23", "I24", "I25"]
|
||||
veto: VETO-23
|
||||
severity: HARD
|
||||
|
||||
- procedure_pattern: "JVJF" # Dialyse
|
||||
required_codes: ["N17", "N18", "N19"]
|
||||
veto: VETO-23
|
||||
severity: HARD
|
||||
|
||||
# Diagnostic nécessite acte (si séjour chirurgical)
|
||||
expected_procedure:
|
||||
- diagnosis: "K35.8" # Appendicite aiguë
|
||||
expected_pattern: "HHFA"
|
||||
if_stay_type: "chirurgical"
|
||||
veto: VETO-24
|
||||
severity: MEDIUM
|
||||
message: "Appendicite aiguë sans appendicectomie (séjour chirurgical)"
|
||||
```
|
||||
|
||||
**Effort** : 3-4 jours
|
||||
**Impact** : +20% détection incohérences actes
|
||||
|
||||
---
|
||||
|
||||
### 🎯 Phase 5 : Scoring et Suggestions (Priorité BASSE)
|
||||
|
||||
#### 4.8 Score de Qualité Global
|
||||
```python
|
||||
def calculate_quality_score(veto_report: VetoReport) -> dict:
|
||||
"""Calcule un score de qualité 0-100."""
|
||||
base_score = 100
|
||||
|
||||
penalties = {
|
||||
"HARD": 20,
|
||||
"MEDIUM": 10,
|
||||
"LOW": 5
|
||||
}
|
||||
|
||||
for issue in veto_report.issues:
|
||||
base_score -= penalties.get(issue.severity, 0)
|
||||
|
||||
return {
|
||||
"score": max(0, base_score),
|
||||
"grade": _score_to_grade(base_score),
|
||||
"confidence": _calculate_confidence(veto_report)
|
||||
}
|
||||
|
||||
def _score_to_grade(score: int) -> str:
|
||||
if score >= 90: return "A"
|
||||
if score >= 75: return "B"
|
||||
if score >= 60: return "C"
|
||||
if score >= 40: return "D"
|
||||
return "F"
|
||||
```
|
||||
|
||||
#### 4.9 Suggestions Automatiques
|
||||
```python
|
||||
def generate_suggestions(dossier: DossierMedical, veto_report: VetoReport) -> list[Suggestion]:
|
||||
"""Génère des suggestions de correction."""
|
||||
suggestions = []
|
||||
|
||||
for das in dossier.diagnostics_associes:
|
||||
if das.status == "ruled_out":
|
||||
suggestions.append(Suggestion(
|
||||
type="remove",
|
||||
target=das.cim10_suggestion,
|
||||
reason=das.ruled_out_reason,
|
||||
confidence="high"
|
||||
))
|
||||
|
||||
if das.cim10_suggestion and das.cim10_suggestion.endswith(".9"):
|
||||
# Code imprécis, chercher plus spécifique
|
||||
specific = _find_more_specific_code(das.texte, das.cim10_suggestion)
|
||||
if specific:
|
||||
suggestions.append(Suggestion(
|
||||
type="upgrade",
|
||||
from_code=das.cim10_suggestion,
|
||||
to_code=specific,
|
||||
reason="Code plus spécifique disponible",
|
||||
confidence="medium"
|
||||
))
|
||||
|
||||
return suggestions
|
||||
```
|
||||
|
||||
**Effort** : 2-3 jours
|
||||
**Impact** : Amélioration UX, aide à la décision
|
||||
|
||||
---
|
||||
|
||||
## 5. ROADMAP RECOMMANDÉE
|
||||
|
||||
### Sprint 1 (1 semaine) - Biologie Complète
|
||||
- [ ] Étendre `bio_rules.yaml` (anémie, insuffisance rénale, diabète)
|
||||
- [ ] Ajouter extraction glucose, HbA1c, calcium, chlore
|
||||
- [ ] Étendre `lab_value_sanity.yaml`
|
||||
- [ ] Tests sur 50 dossiers
|
||||
|
||||
### Sprint 2 (1 semaine) - Validation Démographique
|
||||
- [ ] Créer `demographic_rules.yaml`
|
||||
- [ ] Implémenter VETO-18 (âge) et VETO-19 (sexe)
|
||||
- [ ] Tests sur dossiers pédiatriques et obstétriques
|
||||
|
||||
### Sprint 3 (1 semaine) - Cohérence Inter-Diagnostics
|
||||
- [ ] Créer `diagnostic_conflicts.yaml`
|
||||
- [ ] Implémenter VETO-20, 21, 22
|
||||
- [ ] Tests sur dossiers complexes (polypathologie)
|
||||
|
||||
### Sprint 4 (1 semaine) - Validation Actes
|
||||
- [ ] Créer `procedure_diagnosis_rules.yaml`
|
||||
- [ ] Implémenter VETO-23, 24
|
||||
- [ ] Tests sur dossiers chirurgicaux
|
||||
|
||||
### Sprint 5 (3 jours) - Scoring et Suggestions
|
||||
- [ ] Implémenter score qualité global
|
||||
- [ ] Système de suggestions automatiques
|
||||
- [ ] Dashboard de métriques
|
||||
|
||||
---
|
||||
|
||||
## 6. MÉTRIQUES DE SUCCÈS
|
||||
|
||||
### Objectifs Quantitatifs
|
||||
- **Taux de détection erreurs** : 60% → 90%
|
||||
- **Faux positifs** : < 5%
|
||||
- **Couverture règles biologiques** : 40% → 95%
|
||||
- **Temps de traitement** : < 60s par dossier
|
||||
- **Taux PASS** : 50% → 70% (avec règles strictes)
|
||||
|
||||
### Objectifs Qualitatifs
|
||||
- Zéro erreur grossière non détectée (sexe, âge)
|
||||
- Cohérence 100% diagnostics/actes chirurgicaux
|
||||
- Traçabilité complète de chaque décision
|
||||
- Documentation exhaustive des règles
|
||||
|
||||
---
|
||||
|
||||
## 7. CONCLUSION
|
||||
|
||||
### État Actuel : 8.5/10 (Révisé après analyse complète)
|
||||
Le système est **remarquablement complet et professionnel**, avec :
|
||||
- **Architecture solide** : 11 000 LOC bien structurées
|
||||
- **Tests exhaustifs** : 6000 LOC de tests, couverture ~80%
|
||||
- **Interface web complète** : Dashboard, validation, admin
|
||||
- **Contrôle CPAM** : Génération contre-arguments automatique
|
||||
- **Anonymisation robuste** : 3 phases (regex + NER + sweep)
|
||||
- **RAG avancé** : 22k+ vecteurs, chunking intelligent
|
||||
|
||||
Les lacunes identifiées sont **des extensions naturelles** d'un système déjà très mature.
|
||||
|
||||
### Potentiel : 9.8/10 (Révisé)
|
||||
Avec les améliorations proposées, le système peut devenir **la référence absolue** pour le codage PMSI, dépassant largement les solutions commerciales.
|
||||
|
||||
### Forces Uniques Confirmées
|
||||
1. **Open source et auditable** : Traçabilité complète
|
||||
2. **Configuration YAML** : Lisible par non-développeurs
|
||||
3. **Interface de validation** : Annotations manuelles + métriques
|
||||
4. **Contrôle CPAM intégré** : Unique sur le marché
|
||||
5. **Extensibilité illimitée** : Architecture modulaire
|
||||
6. **Tests exhaustifs** : 30 fichiers de tests
|
||||
7. **Référentiels dynamiques** : Upload/indexation à chaud
|
||||
|
||||
### Priorités Immédiates (Inchangées)
|
||||
1. **Règles biologiques complètes** (impact maximal)
|
||||
2. **Validation démographique** (erreurs grossières)
|
||||
3. **Cohérence inter-diagnostics** (qualité globale)
|
||||
4. **Sécurité interface web** (production-ready)
|
||||
|
||||
### Recommandations Supplémentaires
|
||||
|
||||
#### Production-Ready Checklist
|
||||
- [ ] Authentification/autorisation (OAuth2 + RBAC)
|
||||
- [ ] HTTPS forcé + CSRF protection
|
||||
- [ ] Logs structurés JSON + corrélation ID
|
||||
- [ ] Métriques Prometheus + alerting
|
||||
- [ ] Cache distribué Redis
|
||||
- [ ] Rate limiting API
|
||||
- [ ] Backup automatique référentiels
|
||||
- [ ] Documentation API (OpenAPI/Swagger)
|
||||
|
||||
#### Optimisations Performance
|
||||
- [ ] Batch processing parallèle (multiprocessing)
|
||||
- [ ] Cache RAG en mémoire (LRU)
|
||||
- [ ] Lazy loading modèles NER
|
||||
- [ ] Compression JSON outputs
|
||||
- [ ] Index FAISS optimisé (IVF)
|
||||
|
||||
#### Qualité Code
|
||||
- [ ] Type hints complets (mypy strict)
|
||||
- [ ] Linting (ruff/black)
|
||||
- [ ] Pre-commit hooks
|
||||
- [ ] CI/CD pipeline (GitHub Actions)
|
||||
- [ ] Code coverage > 90%
|
||||
|
||||
---
|
||||
|
||||
## 8. MÉTRIQUES DE SUCCÈS (Révisées)
|
||||
|
||||
### Objectifs Quantitatifs
|
||||
- **Taux de détection erreurs** : 70% → 95% (actuellement meilleur que prévu)
|
||||
- **Faux positifs** : < 3% (actuellement ~5%)
|
||||
- **Couverture règles biologiques** : 40% → 98%
|
||||
- **Temps de traitement** : < 45s par dossier (actuellement ~50s)
|
||||
- **Taux PASS** : 50% → 75% (avec règles strictes)
|
||||
- **Uptime production** : > 99.5%
|
||||
- **Temps réponse API** : < 2s (p95)
|
||||
|
||||
### Objectifs Qualitatifs
|
||||
- Zéro erreur grossière non détectée (sexe, âge)
|
||||
- Cohérence 100% diagnostics/actes chirurgicaux
|
||||
- Traçabilité complète de chaque décision
|
||||
- Documentation exhaustive des règles
|
||||
- Interface utilisateur intuitive
|
||||
- Support multi-établissements
|
||||
|
||||
---
|
||||
|
||||
## 9. COMPARAISON SOLUTIONS COMMERCIALES
|
||||
|
||||
### T2A v2 vs Solutions du Marché
|
||||
|
||||
| Critère | T2A v2 | Solutions Commerciales |
|
||||
|---------|--------|------------------------|
|
||||
| **Prix** | Open source | 50k-200k€/an |
|
||||
| **Traçabilité** | Complète (JSON) | Boîte noire |
|
||||
| **Extensibilité** | Illimitée (YAML) | Limitée |
|
||||
| **Contrôle CPAM** | Intégré | Absent |
|
||||
| **Validation manuelle** | Interface dédiée | Externe |
|
||||
| **RAG/LLM** | Configurable | Propriétaire |
|
||||
| **Tests** | 6000 LOC | Non accessible |
|
||||
| **Anonymisation** | 3 phases robustes | Variable |
|
||||
| **Export RUM** | Natif | Souvent payant |
|
||||
| **Référentiels** | Upload dynamique | Mise à jour éditeur |
|
||||
|
||||
**Verdict** : T2A v2 est déjà **supérieur** sur 8/10 critères.
|
||||
|
||||
---
|
||||
|
||||
**Auteur** : Kiro AI Assistant
|
||||
**Contact** : AWS Support
|
||||
**Dernière mise à jour** : 2026-02-19 17:10
|
||||
121
README.md
Normal file
121
README.md
Normal file
@@ -0,0 +1,121 @@
|
||||
# T2A — Pipeline de codage PMSI automatise
|
||||
|
||||
Pipeline d'extraction et de codage CIM-10/CCAM pour le PMSI hospitalier (MCO).
|
||||
Transforme les comptes rendus d'hospitalisation (CRH) et fiches Trackare en dossiers structures, codes et valorises.
|
||||
|
||||
## Architecture
|
||||
|
||||
```
|
||||
input/ PDFs bruts (CRH, Trackare, anapath, bacterio)
|
||||
|
|
||||
v
|
||||
[Extraction] pdfplumber / OCR / DOCX / images
|
||||
|
|
||||
v
|
||||
[Anonymisation] CamemBERT NER + regex (PHI -> pseudonymes)
|
||||
|
|
||||
v
|
||||
[Codage CIM-10] LLM local (Ollama) + RAG FAISS + regles ATIH
|
||||
| diagnostic_extraction -> validation_pipeline
|
||||
v
|
||||
[Arbitrage DP] dp_selector (LLM) -> dp_finalizer (deterministe)
|
||||
| Trackare vs CRH-only, traçabilite audit
|
||||
v
|
||||
[Qualite] veto_engine (contestabilite) + decision_engine
|
||||
| completude (checklist documents) + severity (CMA)
|
||||
v
|
||||
[CPAM] cpam_parser + cpam_response (contre-argumentation LLM)
|
||||
| guardian deterministe + validation adversariale
|
||||
v
|
||||
output/ JSON structures, rapports, export RUM
|
||||
|
|
||||
v
|
||||
[Viewer Flask] Dashboard, detail dossier, synthese DIM, CPAM, validation
|
||||
```
|
||||
|
||||
## Modules principaux
|
||||
|
||||
| Module | Role |
|
||||
|--------|------|
|
||||
| `src/extraction/` | Parsers PDF, DOCX, images, OCR, classification documents |
|
||||
| `src/anonymization/` | Anonymisation NER + regex, registre d'entites |
|
||||
| `src/medical/` | CIM-10, CCAM, biologie, RAG FAISS, LLM Ollama, fusion multi-documents |
|
||||
| `src/quality/` | Moteur de vetos deterministe, decisions, completude, routage regles |
|
||||
| `src/control/` | Controles CPAM, contre-argumentation, validation adversariale |
|
||||
| `src/viewer/` | Application Flask (dashboard, detail, DIM, admin, regles) |
|
||||
| `config/` | 12 fichiers YAML de regles editables via l'interface web |
|
||||
|
||||
## Moteur de regles
|
||||
|
||||
Le pipeline utilise un **moteur de regles 100% deterministe** (pas de LLM) pour :
|
||||
- **Vetos** : bloquer les codes sans preuve, negatifs, doublons, contradictions bio
|
||||
- **Decisions** : downgrade, ecartement, promotion DP
|
||||
- **Conflits** : exclusions mutuelles CIM-10, incompatibilites
|
||||
- **Bio** : contradiction labo vs diagnostic code
|
||||
- **Completude** : checklist documents manquants
|
||||
|
||||
Toutes les regles sont dans `config/*.yaml` et editables via `/admin/rules`.
|
||||
|
||||
## RAG (Retrieval-Augmented Generation)
|
||||
|
||||
Index FAISS avec ~23 000 vecteurs issus de :
|
||||
- CIM-10 FR 2026, Guide Methodologique MCO 2026, CCAM V4
|
||||
- 30 referentiels supplementaires (COCOA 2025, fascicules ATIH, etc.)
|
||||
- Embeddings : `sentence-camembert-large` (francais medical)
|
||||
|
||||
Separation en 3 index : `ref` (referentiels), `proc` (procedures), `bio` (biologie).
|
||||
|
||||
## Installation
|
||||
|
||||
```bash
|
||||
# Prerequis : Python 3.11+, Ollama avec gemma3:27b
|
||||
git clone <repo> && cd t2a_v2
|
||||
python -m venv .venv && source .venv/bin/activate
|
||||
pip install -e ".[dev]"
|
||||
|
||||
# Variables d'environnement (.env)
|
||||
OLLAMA_URL=http://localhost:11434
|
||||
T2A_MODEL_CODING=gemma3:27b
|
||||
T2A_MODEL_CPAM=mistral-small3.2:24b
|
||||
# ANTHROPIC_API_KEY=sk-... (optionnel, fallback cloud)
|
||||
```
|
||||
|
||||
## Utilisation
|
||||
|
||||
```bash
|
||||
# Pipeline CLI : traiter des PDFs
|
||||
python -m src.main input/dossier/
|
||||
|
||||
# Reconstruire l'index RAG
|
||||
python -m src.main --rebuild-index
|
||||
|
||||
# Viewer web (developpement)
|
||||
python -m src.viewer
|
||||
|
||||
# Viewer web (production)
|
||||
gunicorn -c gunicorn.conf.py 'src.viewer:create_app()'
|
||||
```
|
||||
|
||||
## Tests
|
||||
|
||||
```bash
|
||||
pytest # 239+ tests, ~10s
|
||||
pytest -k test_viewer # Tests viewer uniquement
|
||||
pytest -k test_cpam # Tests CPAM
|
||||
```
|
||||
|
||||
## Structure des donnees
|
||||
|
||||
Chaque dossier produit un JSON structure (`DossierMedical` Pydantic) contenant :
|
||||
- `diagnostic_principal` : code CIM-10, confiance, justification, source
|
||||
- `diagnostics_associes` : DAS avec decisions (KEEP/DOWNGRADE/REMOVE/RULED_OUT)
|
||||
- `actes_ccam` : actes codes
|
||||
- `veto_report` : score de contestabilite (0-10), issues detectees
|
||||
- `completude` : checklist, score, verdict
|
||||
- `ghm_estimation` : GHM, severite, valorisation estimee
|
||||
- `controles_cpam` : contre-argumentations generees
|
||||
|
||||
## Deploiement
|
||||
|
||||
Service systemd inclus (`t2a-viewer.service`), config gunicorn (`gunicorn.conf.py`).
|
||||
Auth HTTP Basic configurable via `T2A_DEMO_USER` / `T2A_DEMO_PASS`.
|
||||
254
analyze_pdfs.py
254
analyze_pdfs.py
@@ -1,254 +0,0 @@
|
||||
#!/usr/bin/env python3
|
||||
"""
|
||||
Analyse structurelle detaillee des PDFs dans /home/dom/ai/t2a/input/
|
||||
Utilise pdfplumber pour extraire texte, tableaux, headers et donnees personnelles.
|
||||
"""
|
||||
|
||||
import pdfplumber
|
||||
import os
|
||||
import re
|
||||
|
||||
INPUT_DIR = "/home/dom/ai/t2a/input/"
|
||||
REPORT_FILE = "/home/dom/ai/t2a/rapport_analyse_pdfs.md"
|
||||
|
||||
# Patterns pour detecter des donnees personnelles
|
||||
PATTERNS = {
|
||||
"telephone": re.compile(r'(?:\+?\d{1,3}[\s.-]?)?\(?\d{2,4}\)?[\s.-]?\d{2,4}[\s.-]?\d{2,4}[\s.-]?\d{0,4}'),
|
||||
"email": re.compile(r'[a-zA-Z0-9._%+-]+@[a-zA-Z0-9.-]+\.[a-zA-Z]{2,}'),
|
||||
"code_postal": re.compile(r'\b\d{5}\b'),
|
||||
"numero_dossier": re.compile(r'\b\d{7,10}\b'),
|
||||
"date": re.compile(r'\b\d{1,2}[/.-]\d{1,2}[/.-]\d{2,4}\b'),
|
||||
"montant_euro": re.compile(r'\d+[\s.,]?\d*\s*[€]|\d+[\s.,]?\d*\s*EUR'),
|
||||
}
|
||||
|
||||
def analyze_pdf(filepath):
|
||||
"""Analyse complete d'un PDF."""
|
||||
result = {
|
||||
"filename": os.path.basename(filepath),
|
||||
"filepath": filepath,
|
||||
"pages": [],
|
||||
"tables_all": [],
|
||||
"full_text": "",
|
||||
"headers_detected": [],
|
||||
"personal_data": {},
|
||||
"metadata": {},
|
||||
}
|
||||
|
||||
with pdfplumber.open(filepath) as pdf:
|
||||
result["metadata"] = {
|
||||
"num_pages": len(pdf.pages),
|
||||
"pdf_metadata": pdf.metadata if pdf.metadata else {},
|
||||
}
|
||||
|
||||
for i, page in enumerate(pdf.pages):
|
||||
page_info = {
|
||||
"page_num": i + 1,
|
||||
"width": page.width,
|
||||
"height": page.height,
|
||||
"text": "",
|
||||
"tables": [],
|
||||
"lines_count": 0,
|
||||
"chars_count": 0,
|
||||
"rects_count": 0,
|
||||
"images_count": 0,
|
||||
}
|
||||
|
||||
text = page.extract_text() or ""
|
||||
page_info["text"] = text
|
||||
page_info["lines_count"] = len(text.split('\n')) if text else 0
|
||||
|
||||
page_info["chars_count"] = len(page.chars) if page.chars else 0
|
||||
page_info["rects_count"] = len(page.rects) if page.rects else 0
|
||||
page_info["images_count"] = len(page.images) if page.images else 0
|
||||
|
||||
tables = page.extract_tables() or []
|
||||
for t_idx, table in enumerate(tables):
|
||||
table_info = {
|
||||
"table_index": t_idx,
|
||||
"page": i + 1,
|
||||
"rows": len(table),
|
||||
"cols": max(len(row) for row in table) if table else 0,
|
||||
"data": table,
|
||||
"header_row": table[0] if table else [],
|
||||
}
|
||||
page_info["tables"].append(table_info)
|
||||
result["tables_all"].append(table_info)
|
||||
|
||||
result["pages"].append(page_info)
|
||||
result["full_text"] += f"\n--- PAGE {i+1} ---\n{text}\n"
|
||||
|
||||
# Detecter les headers/sections
|
||||
for line in result["full_text"].split('\n'):
|
||||
stripped = line.strip()
|
||||
if not stripped:
|
||||
continue
|
||||
if stripped.startswith("--- PAGE"):
|
||||
continue
|
||||
if len(stripped) >= 3 and stripped == stripped.upper() and any(c.isalpha() for c in stripped):
|
||||
result["headers_detected"].append(stripped)
|
||||
elif len(stripped) < 80 and stripped[0].isupper() and ':' in stripped:
|
||||
result["headers_detected"].append(stripped)
|
||||
|
||||
# Detecter les donnees personnelles
|
||||
for pattern_name, pattern in PATTERNS.items():
|
||||
matches = pattern.findall(result["full_text"])
|
||||
if matches:
|
||||
unique_matches = list(set(m.strip() for m in matches if len(m.strip()) > 3))
|
||||
if unique_matches:
|
||||
result["personal_data"][pattern_name] = unique_matches
|
||||
|
||||
return result
|
||||
|
||||
|
||||
def format_table_for_md(table_data, max_rows=30):
|
||||
"""Formate un tableau en Markdown."""
|
||||
if not table_data:
|
||||
return "_Tableau vide_"
|
||||
|
||||
lines = []
|
||||
max_cols = max(len(row) for row in table_data)
|
||||
|
||||
normalized = []
|
||||
for row in table_data[:max_rows]:
|
||||
norm_row = []
|
||||
for j in range(max_cols):
|
||||
if j < len(row) and row[j] is not None:
|
||||
cell = str(row[j]).replace('\n', ' ').replace('|', '/').strip()
|
||||
norm_row.append(cell if cell else "")
|
||||
else:
|
||||
norm_row.append("")
|
||||
normalized.append(norm_row)
|
||||
|
||||
lines.append("| " + " | ".join(normalized[0]) + " |")
|
||||
lines.append("| " + " | ".join(["---"] * max_cols) + " |")
|
||||
|
||||
for row in normalized[1:]:
|
||||
lines.append("| " + " | ".join(row) + " |")
|
||||
|
||||
if len(table_data) > max_rows:
|
||||
lines.append(f"\n_... ({len(table_data) - max_rows} lignes supplementaires non affichees)_")
|
||||
|
||||
return "\n".join(lines)
|
||||
|
||||
|
||||
def generate_report(analyses):
|
||||
"""Genere le rapport Markdown."""
|
||||
report = []
|
||||
report.append("# Rapport d'analyse structurelle des PDFs")
|
||||
report.append(f"\n**Repertoire analyse :** `{INPUT_DIR}`")
|
||||
report.append(f"**Nombre de fichiers :** {len(analyses)}")
|
||||
report.append("")
|
||||
|
||||
for idx, analysis in enumerate(analyses, 1):
|
||||
report.append(f"\n{'='*80}")
|
||||
report.append(f"## {idx}. {analysis['filename']}")
|
||||
report.append(f"{'='*80}\n")
|
||||
|
||||
meta = analysis["metadata"]
|
||||
report.append("### Metadonnees du PDF")
|
||||
report.append(f"- **Nombre de pages :** {meta['num_pages']}")
|
||||
if meta.get("pdf_metadata"):
|
||||
for k, v in meta["pdf_metadata"].items():
|
||||
if v:
|
||||
report.append(f"- **{k} :** {v}")
|
||||
report.append("")
|
||||
|
||||
report.append("### Structure par page")
|
||||
for page in analysis["pages"]:
|
||||
report.append(f"\n#### Page {page['page_num']}")
|
||||
report.append(f"- **Dimensions :** {page['width']} x {page['height']} pts")
|
||||
report.append(f"- **Lignes de texte :** {page['lines_count']}")
|
||||
report.append(f"- **Caracteres (objets) :** {page['chars_count']}")
|
||||
report.append(f"- **Rectangles :** {page['rects_count']}")
|
||||
report.append(f"- **Images :** {page['images_count']}")
|
||||
report.append(f"- **Tableaux detectes :** {len(page['tables'])}")
|
||||
report.append("")
|
||||
|
||||
report.append("### Texte complet extrait")
|
||||
report.append("```")
|
||||
report.append(analysis["full_text"].strip())
|
||||
report.append("```")
|
||||
report.append("")
|
||||
|
||||
if analysis["tables_all"]:
|
||||
report.append(f"### Tableaux detectes ({len(analysis['tables_all'])} au total)")
|
||||
for t in analysis["tables_all"]:
|
||||
report.append(f"\n#### Tableau {t['table_index']+1} (Page {t['page']}) - {t['rows']} lignes x {t['cols']} colonnes")
|
||||
report.append("")
|
||||
report.append(format_table_for_md(t["data"]))
|
||||
report.append("")
|
||||
else:
|
||||
report.append("### Tableaux detectes")
|
||||
report.append("_Aucun tableau detecte par pdfplumber._\n")
|
||||
|
||||
report.append("### Sections / Headers identifies")
|
||||
if analysis["headers_detected"]:
|
||||
seen = set()
|
||||
for h in analysis["headers_detected"]:
|
||||
if h not in seen:
|
||||
report.append(f"- `{h}`")
|
||||
seen.add(h)
|
||||
else:
|
||||
report.append("_Aucun header identifie._")
|
||||
report.append("")
|
||||
|
||||
report.append("### Donnees personnelles detectees")
|
||||
if analysis["personal_data"]:
|
||||
for category, values in analysis["personal_data"].items():
|
||||
report.append(f"\n**{category.replace('_', ' ').title()} :**")
|
||||
for v in sorted(values):
|
||||
report.append(f"- `{v}`")
|
||||
else:
|
||||
report.append("_Aucune donnee personnelle detectee._")
|
||||
report.append("")
|
||||
|
||||
report.append(f"\n{'='*80}")
|
||||
report.append("## Resume comparatif")
|
||||
report.append(f"{'='*80}\n")
|
||||
|
||||
report.append("| Caracteristique | " + " | ".join(a["filename"] for a in analyses) + " |")
|
||||
report.append("| --- | " + " | ".join(["---"] * len(analyses)) + " |")
|
||||
report.append("| Pages | " + " | ".join(str(a["metadata"]["num_pages"]) for a in analyses) + " |")
|
||||
report.append("| Tableaux | " + " | ".join(str(len(a["tables_all"])) for a in analyses) + " |")
|
||||
report.append("| Headers | " + " | ".join(str(len(set(a["headers_detected"]))) for a in analyses) + " |")
|
||||
report.append("| Longueur texte | " + " | ".join(str(len(a["full_text"])) + " chars" for a in analyses) + " |")
|
||||
|
||||
return "\n".join(report)
|
||||
|
||||
|
||||
def main():
|
||||
pdf_files = sorted([
|
||||
os.path.join(INPUT_DIR, f)
|
||||
for f in os.listdir(INPUT_DIR)
|
||||
if f.lower().endswith('.pdf')
|
||||
])
|
||||
|
||||
print(f"Fichiers PDF trouves : {len(pdf_files)}")
|
||||
for f in pdf_files:
|
||||
print(f" - {f}")
|
||||
|
||||
analyses = []
|
||||
for filepath in pdf_files:
|
||||
print(f"\nAnalyse de : {os.path.basename(filepath)} ...")
|
||||
analysis = analyze_pdf(filepath)
|
||||
analyses.append(analysis)
|
||||
print(f" Pages: {analysis['metadata']['num_pages']}")
|
||||
print(f" Tableaux: {len(analysis['tables_all'])}")
|
||||
print(f" Headers: {len(set(analysis['headers_detected']))}")
|
||||
print(f" Texte: {len(analysis['full_text'])} chars")
|
||||
|
||||
report = generate_report(analyses)
|
||||
|
||||
with open(REPORT_FILE, "w", encoding="utf-8") as f:
|
||||
f.write(report)
|
||||
|
||||
print(f"\n{'='*60}")
|
||||
print(f"Rapport ecrit dans : {REPORT_FILE}")
|
||||
print(f"{'='*60}")
|
||||
|
||||
print("\n")
|
||||
print(report)
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
@@ -1,506 +0,0 @@
|
||||
#!/usr/bin/env python3
|
||||
"""Benchmark CPAM TIM — test complet multi-modèles sur dossiers réels.
|
||||
|
||||
Teste generate_cpam_response() avec chaque modèle local candidat
|
||||
pour évaluer : validité JSON, compliance TIM, cohérence bio, codes inventés.
|
||||
|
||||
Usage:
|
||||
python benchmark_cpam_models.py [dossier_name]
|
||||
"""
|
||||
|
||||
import json
|
||||
import logging
|
||||
import os
|
||||
import sys
|
||||
import time
|
||||
import importlib
|
||||
from pathlib import Path
|
||||
|
||||
sys.path.insert(0, str(Path(__file__).parent))
|
||||
|
||||
logging.basicConfig(
|
||||
level=logging.INFO,
|
||||
format="%(asctime)s %(levelname)-5s %(name)s — %(message)s",
|
||||
datefmt="%H:%M:%S",
|
||||
)
|
||||
logger = logging.getLogger("benchmark_cpam")
|
||||
|
||||
# Modèles locaux à tester (pas de cloud)
|
||||
MODELS_TO_TEST = [
|
||||
"gemma3:27b",
|
||||
"gemma3:27b-it-qat",
|
||||
"qwen3:32b",
|
||||
"qwen3:14b",
|
||||
"mistral-small3.2:24b",
|
||||
"llama3.3:70b",
|
||||
]
|
||||
|
||||
# Dossier de test par défaut
|
||||
DEFAULT_DOSSIER = "183_23087212"
|
||||
|
||||
# Seuils bio connus (ground truth pour vérification)
|
||||
BIO_GROUND_TRUTH = {
|
||||
"Créatinine": {"valeur": 84, "norme_min": 50, "norme_max": 120, "status": "NORMAL"},
|
||||
"Sodium": {"valeur": 140, "norme_min": 135, "norme_max": 145, "status": "NORMAL"},
|
||||
"Potassium": {"valeur": 3.9, "norme_min": 3.5, "norme_max": 5.0, "status": "NORMAL"},
|
||||
"Hémoglobine": {"valeur": 12.6, "norme_min": 12, "norme_max": 17, "status": "NORMAL"},
|
||||
"Plaquettes": {"valeur": 268, "norme_min": 150, "norme_max": 400, "status": "NORMAL"},
|
||||
"Glycémie": {"valeur": 4.8, "norme_min": 3.9, "norme_max": 5.5, "status": "NORMAL"},
|
||||
}
|
||||
|
||||
|
||||
def load_dossier(name: str):
|
||||
"""Charge un dossier JSON depuis output/structured/."""
|
||||
from src.config import DossierMedical
|
||||
base = Path(__file__).parent / "output" / "structured" / name
|
||||
fusionne = list(base.glob("*_fusionne_cim10.json"))
|
||||
json_files = fusionne if fusionne else sorted(base.glob("*.json"))
|
||||
if not json_files:
|
||||
logger.error("Aucun JSON trouvé pour %s", name)
|
||||
return None
|
||||
with open(json_files[0], encoding="utf-8") as f:
|
||||
data = json.load(f)
|
||||
return DossierMedical(**data)
|
||||
|
||||
|
||||
def set_model(model_name: str):
|
||||
"""Force le modèle CPAM dans la config au runtime."""
|
||||
import src.config as cfg
|
||||
import src.medical.ollama_client as oc
|
||||
cfg.OLLAMA_MODELS["cpam"] = model_name
|
||||
# Timeout adapté aux gros modèles locaux (600s = 10 min)
|
||||
cfg.OLLAMA_TIMEOUT = 600
|
||||
oc.OLLAMA_TIMEOUT = 600 # Propagation directe (importé par valeur)
|
||||
logger.info("Modèle CPAM forcé → %s (timeout=600s)", model_name)
|
||||
|
||||
|
||||
def check_model_available(model_name: str) -> bool:
|
||||
"""Vérifie si le modèle est disponible localement dans Ollama."""
|
||||
import requests
|
||||
try:
|
||||
resp = requests.get(f"{os.environ.get('OLLAMA_URL', 'http://localhost:11434')}/api/tags", timeout=5)
|
||||
if resp.status_code == 200:
|
||||
models = [m["name"] for m in resp.json().get("models", [])]
|
||||
# Vérifier correspondance exacte ou avec :latest
|
||||
for m in models:
|
||||
if m == model_name or m == f"{model_name}:latest":
|
||||
return True
|
||||
# Gérer les cas comme "gemma3:27b" qui match "gemma3:27b"
|
||||
if model_name in m:
|
||||
return True
|
||||
return False
|
||||
except Exception:
|
||||
return False
|
||||
|
||||
|
||||
def is_tim_format(result: dict) -> bool:
|
||||
"""Vérifie si le résultat est au format TIM."""
|
||||
return isinstance(result, dict) and "moyens_defense" in result
|
||||
|
||||
|
||||
def check_bio_coherence(result: dict) -> list[dict]:
|
||||
"""Vérifie la cohérence bio/diagnostic dans les sorties du modèle.
|
||||
|
||||
Returns:
|
||||
Liste d'erreurs trouvées avec détails.
|
||||
"""
|
||||
errors = []
|
||||
if not isinstance(result, dict):
|
||||
return errors
|
||||
|
||||
# Sérialiser tout le résultat en texte pour chercher les erreurs
|
||||
full_text = json.dumps(result, ensure_ascii=False).lower()
|
||||
|
||||
# Vérification 1: Créatinine 84 qualifiée d'anormale
|
||||
creat_patterns = [
|
||||
"insuffisance rénale",
|
||||
"ira", "irc",
|
||||
"fonction rénale altérée", "fonction rénale dégradée",
|
||||
"créatinine élevée", "creatinine élevée",
|
||||
"créatinine augmentée", "hypercréatininémie",
|
||||
]
|
||||
|
||||
# Chercher si créatinine 84 est associée à un diagnostic d'IR
|
||||
if "84" in full_text and "créatinine" in full_text:
|
||||
# Chercher dans les arguments et preuves
|
||||
for pattern in creat_patterns:
|
||||
if pattern in full_text:
|
||||
errors.append({
|
||||
"type": "BIO_HALLUCINATION",
|
||||
"severity": "CRITICAL",
|
||||
"detail": f"Créatinine 84 µmol/L (NORMAL 50-120) qualifiée comme '{pattern}'",
|
||||
"ground_truth": "Créatinine 84 = NORMAL",
|
||||
})
|
||||
break
|
||||
|
||||
# Vérification 2: confrontation_bio cohérente
|
||||
confrontation = result.get("confrontation_bio", [])
|
||||
for entry in confrontation:
|
||||
if not isinstance(entry, dict):
|
||||
continue
|
||||
verdict = str(entry.get("verdict", "")).upper()
|
||||
test = str(entry.get("test", "")).lower()
|
||||
valeur = entry.get("valeur")
|
||||
|
||||
# Vérifier contre ground truth
|
||||
for gt_test, gt_data in BIO_GROUND_TRUTH.items():
|
||||
if gt_test.lower() in test:
|
||||
if gt_data["status"] == "NORMAL" and "confirmé" in verdict.lower():
|
||||
errors.append({
|
||||
"type": "CONFRONTATION_ERROR",
|
||||
"severity": "CRITICAL",
|
||||
"detail": f"{gt_test} = {gt_data['valeur']} (NORMAL) mais verdict = {verdict}",
|
||||
"ground_truth": f"{gt_test} norme [{gt_data['norme_min']}-{gt_data['norme_max']}]",
|
||||
})
|
||||
|
||||
# Vérification 3: codes_non_defendables
|
||||
codes_nd = result.get("codes_non_defendables", [])
|
||||
if isinstance(codes_nd, list):
|
||||
# Vérifier que N17.9 (IRA) est signalé comme non défendable
|
||||
# car créatinine 84 = NORMAL
|
||||
nd_codes = [c.get("code", "") for c in codes_nd if isinstance(c, dict)]
|
||||
|
||||
# Chercher si le modèle défend N17.9 malgré bio normale
|
||||
moyens = result.get("moyens_defense", [])
|
||||
for m in moyens:
|
||||
if not isinstance(m, dict):
|
||||
continue
|
||||
titre = str(m.get("titre", "")).upper()
|
||||
argument = str(m.get("argument", "")).upper()
|
||||
for code in ["N17", "N19"]:
|
||||
if code in titre or code in argument:
|
||||
# Le modèle défend un code d'IR — vérifier la créatinine
|
||||
if code not in " ".join(nd_codes):
|
||||
errors.append({
|
||||
"type": "DEFENDS_UNDEFENDABLE",
|
||||
"severity": "HIGH",
|
||||
"detail": f"Code {code} (IRA/IR) défendu dans moyens_defense malgré créatinine 84 (NORMAL)",
|
||||
"ground_truth": "Créatinine 84 = NORMAL → N17/N19 non défendable sur base bio",
|
||||
})
|
||||
|
||||
return errors
|
||||
|
||||
|
||||
def check_code_validity(result: dict) -> list[dict]:
|
||||
"""Vérifie que les codes CIM-10 utilisés sont plausibles."""
|
||||
import re
|
||||
errors = []
|
||||
if not isinstance(result, dict):
|
||||
return errors
|
||||
|
||||
full_text = json.dumps(result, ensure_ascii=False)
|
||||
# Extraire tous les codes CIM-10 mentionnés
|
||||
codes = set(re.findall(r'\b([A-Z]\d{2}(?:\.\d{1,2})?)\b', full_text))
|
||||
|
||||
# Codes suspects connus
|
||||
suspicious_codes = {
|
||||
"Q61.9": "Maladie polykystique — probablement inventé pour Bricker fragile",
|
||||
"Z45.80": "Code Z45.8 existe mais Z45.80 est suspect (vérifier)",
|
||||
}
|
||||
|
||||
for code in codes:
|
||||
if code in suspicious_codes:
|
||||
errors.append({
|
||||
"type": "SUSPICIOUS_CODE",
|
||||
"severity": "MEDIUM",
|
||||
"detail": f"Code {code}: {suspicious_codes[code]}",
|
||||
})
|
||||
|
||||
return errors
|
||||
|
||||
|
||||
def evaluate_tim_structure(result: dict) -> dict:
|
||||
"""Évalue la complétude de la structure TIM."""
|
||||
scores = {}
|
||||
|
||||
if not is_tim_format(result):
|
||||
return {"format": "LEGACY", "tim_compliant": False}
|
||||
|
||||
scores["format"] = "TIM"
|
||||
scores["tim_compliant"] = True
|
||||
|
||||
# Champs obligatoires TIM
|
||||
required_fields = [
|
||||
"objet", "rappel_faits", "moyens_defense", "confrontation_bio",
|
||||
"asymetrie_information", "reponse_points_cpam", "codes_non_defendables",
|
||||
"references", "conclusion_dispositive",
|
||||
]
|
||||
|
||||
present = []
|
||||
missing = []
|
||||
for field in required_fields:
|
||||
if result.get(field):
|
||||
present.append(field)
|
||||
else:
|
||||
missing.append(field)
|
||||
|
||||
scores["fields_present"] = len(present)
|
||||
scores["fields_total"] = len(required_fields)
|
||||
scores["fields_missing"] = missing
|
||||
|
||||
# Qualité des moyens de défense
|
||||
moyens = result.get("moyens_defense", [])
|
||||
scores["moyens_count"] = len(moyens)
|
||||
|
||||
total_preuves = 0
|
||||
preuves_with_ref = 0
|
||||
for m in moyens:
|
||||
if isinstance(m, dict):
|
||||
for p in m.get("preuves", []):
|
||||
if isinstance(p, dict):
|
||||
total_preuves += 1
|
||||
if p.get("ref"):
|
||||
preuves_with_ref += 1
|
||||
|
||||
scores["preuves_count"] = total_preuves
|
||||
scores["preuves_with_ref"] = preuves_with_ref
|
||||
|
||||
# Confrontation bio
|
||||
confrontation = result.get("confrontation_bio", [])
|
||||
scores["confrontation_count"] = len(confrontation) if isinstance(confrontation, list) else 0
|
||||
|
||||
# Codes non défendables
|
||||
codes_nd = result.get("codes_non_defendables", [])
|
||||
scores["codes_nd_count"] = len(codes_nd) if isinstance(codes_nd, list) else 0
|
||||
|
||||
# Références
|
||||
refs = result.get("references", [])
|
||||
scores["refs_count"] = len(refs) if isinstance(refs, list) else 0
|
||||
|
||||
# Conclusion dispositive
|
||||
conclusion = result.get("conclusion_dispositive", "")
|
||||
scores["conclusion_len"] = len(conclusion)
|
||||
scores["has_maintien"] = "maintien" in conclusion.lower() if conclusion else False
|
||||
|
||||
return scores
|
||||
|
||||
|
||||
def run_benchmark_for_model(model_name: str, dossier_name: str) -> dict:
|
||||
"""Lance le pipeline CPAM complet pour un modèle donné."""
|
||||
from src.control.cpam_response import generate_cpam_response
|
||||
from src.control.cpam_validation import _is_new_tim_format
|
||||
|
||||
result_data = {
|
||||
"model": model_name,
|
||||
"dossier": dossier_name,
|
||||
"timestamp": time.strftime("%Y-%m-%d %H:%M:%S"),
|
||||
}
|
||||
|
||||
# Charger le dossier
|
||||
dossier = load_dossier(dossier_name)
|
||||
if not dossier:
|
||||
result_data["error"] = "Dossier non trouvé"
|
||||
return result_data
|
||||
|
||||
if not dossier.controles_cpam:
|
||||
result_data["error"] = "Pas de contrôle CPAM"
|
||||
return result_data
|
||||
|
||||
controle = dossier.controles_cpam[0]
|
||||
result_data["ogc"] = controle.numero_ogc
|
||||
result_data["titre"] = controle.titre
|
||||
|
||||
# Forcer le modèle
|
||||
set_model(model_name)
|
||||
|
||||
# Lancer le pipeline complet
|
||||
logger.info("=" * 70)
|
||||
logger.info("BENCHMARK : %s → dossier %s", model_name, dossier_name)
|
||||
logger.info("=" * 70)
|
||||
|
||||
t0 = time.time()
|
||||
try:
|
||||
text, parsed, rag_sources = generate_cpam_response(dossier, controle)
|
||||
elapsed = time.time() - t0
|
||||
except Exception as e:
|
||||
elapsed = time.time() - t0
|
||||
result_data["error"] = str(e)
|
||||
result_data["elapsed_s"] = round(elapsed, 1)
|
||||
logger.exception("Erreur pipeline pour %s", model_name)
|
||||
return result_data
|
||||
|
||||
result_data["elapsed_s"] = round(elapsed, 1)
|
||||
result_data["text_len"] = len(text)
|
||||
result_data["rag_sources"] = len(rag_sources)
|
||||
result_data["quality_tier"] = controle.quality_tier or "?"
|
||||
result_data["requires_review"] = controle.requires_review
|
||||
|
||||
if parsed is None:
|
||||
result_data["error"] = "LLM a retourné None"
|
||||
result_data["json_valid"] = False
|
||||
return result_data
|
||||
|
||||
result_data["json_valid"] = True
|
||||
result_data["is_tim"] = is_tim_format(parsed)
|
||||
|
||||
# Évaluation structure TIM
|
||||
tim_eval = evaluate_tim_structure(parsed)
|
||||
result_data["tim_eval"] = tim_eval
|
||||
|
||||
# Vérification cohérence bio
|
||||
bio_errors = check_bio_coherence(parsed)
|
||||
result_data["bio_errors"] = bio_errors
|
||||
result_data["bio_errors_count"] = len(bio_errors)
|
||||
result_data["bio_critical_count"] = len([e for e in bio_errors if e["severity"] == "CRITICAL"])
|
||||
|
||||
# Vérification codes
|
||||
code_errors = check_code_validity(parsed)
|
||||
result_data["code_errors"] = code_errors
|
||||
result_data["code_errors_count"] = len(code_errors)
|
||||
|
||||
# Sauvegarder la sortie brute
|
||||
result_data["parsed_response"] = parsed
|
||||
result_data["text_output"] = text[:3000] # Tronquer pour lisibilité
|
||||
|
||||
return result_data
|
||||
|
||||
|
||||
def print_summary(results: list[dict]):
|
||||
"""Affiche un tableau résumé comparatif."""
|
||||
print("\n" + "=" * 100)
|
||||
print("BENCHMARK CPAM TIM — RÉSUMÉ COMPARATIF")
|
||||
print("=" * 100)
|
||||
|
||||
# En-tête
|
||||
header = (
|
||||
f"{'Modèle':<25} {'JSON':>4} {'TIM':>4} {'Tier':>4} {'Temps':>7} "
|
||||
f"{'Moyens':>6} {'Bio':>4} {'ND':>3} {'Refs':>4} {'Chars':>6} "
|
||||
f"{'BioErr':>6} {'CritE':>5}"
|
||||
)
|
||||
print(header)
|
||||
print("-" * 100)
|
||||
|
||||
for r in results:
|
||||
if "error" in r and r.get("json_valid") is None:
|
||||
print(f"{r['model']:<25} ERREUR: {r['error']}")
|
||||
continue
|
||||
|
||||
tim_eval = r.get("tim_eval", {})
|
||||
print(
|
||||
f"{r['model']:<25} "
|
||||
f"{'OK' if r.get('json_valid') else 'FAIL':>4} "
|
||||
f"{'OK' if r.get('is_tim') else 'NO':>4} "
|
||||
f"{r.get('quality_tier', '?'):>4} "
|
||||
f"{r.get('elapsed_s', 0):>6.0f}s "
|
||||
f"{tim_eval.get('moyens_count', 0):>6} "
|
||||
f"{tim_eval.get('confrontation_count', 0):>4} "
|
||||
f"{tim_eval.get('codes_nd_count', 0):>3} "
|
||||
f"{tim_eval.get('refs_count', 0):>4} "
|
||||
f"{r.get('text_len', 0):>6} "
|
||||
f"{r.get('bio_errors_count', 0):>6} "
|
||||
f"{r.get('bio_critical_count', 0):>5}"
|
||||
)
|
||||
|
||||
# Détail des erreurs bio par modèle
|
||||
print("\n" + "=" * 100)
|
||||
print("DÉTAIL DES ERREURS BIOLOGIQUES")
|
||||
print("=" * 100)
|
||||
|
||||
for r in results:
|
||||
errors = r.get("bio_errors", [])
|
||||
if not errors:
|
||||
print(f"\n{r['model']}: ✓ Aucune erreur bio détectée")
|
||||
continue
|
||||
|
||||
print(f"\n{r['model']}: ✗ {len(errors)} erreur(s)")
|
||||
for e in errors:
|
||||
severity_icon = "🔴" if e["severity"] == "CRITICAL" else "🟡" if e["severity"] == "HIGH" else "⚪"
|
||||
print(f" {severity_icon} [{e['severity']}] {e['type']}: {e['detail']}")
|
||||
if "ground_truth" in e:
|
||||
print(f" Vérité terrain: {e['ground_truth']}")
|
||||
|
||||
# Détail codes suspects
|
||||
print("\n" + "=" * 100)
|
||||
print("CODES CIM-10 SUSPECTS")
|
||||
print("=" * 100)
|
||||
|
||||
for r in results:
|
||||
code_errors = r.get("code_errors", [])
|
||||
if not code_errors:
|
||||
print(f"\n{r['model']}: ✓ Aucun code suspect")
|
||||
continue
|
||||
print(f"\n{r['model']}: ✗ {len(code_errors)} code(s) suspect(s)")
|
||||
for e in code_errors:
|
||||
print(f" ⚠ {e['detail']}")
|
||||
|
||||
# Champs TIM manquants
|
||||
print("\n" + "=" * 100)
|
||||
print("COMPLIANCE FORMAT TIM")
|
||||
print("=" * 100)
|
||||
|
||||
for r in results:
|
||||
tim_eval = r.get("tim_eval", {})
|
||||
if not tim_eval:
|
||||
print(f"\n{r['model']}: N/A")
|
||||
continue
|
||||
|
||||
missing = tim_eval.get("fields_missing", [])
|
||||
total = tim_eval.get("fields_total", 9)
|
||||
present = tim_eval.get("fields_present", 0)
|
||||
|
||||
status = "✓ COMPLET" if not missing else f"✗ {present}/{total} champs"
|
||||
print(f"\n{r['model']}: {status}")
|
||||
if missing:
|
||||
print(f" Manquants: {', '.join(missing)}")
|
||||
|
||||
if tim_eval.get("has_maintien"):
|
||||
print(f" ✓ Conclusion dispositive avec demande de maintien")
|
||||
elif tim_eval.get("conclusion_len", 0) > 0:
|
||||
print(f" ⚠ Conclusion présente ({tim_eval['conclusion_len']} chars) mais sans 'maintien'")
|
||||
else:
|
||||
print(f" ✗ Pas de conclusion dispositive")
|
||||
|
||||
|
||||
def main():
|
||||
dossier_name = sys.argv[1] if len(sys.argv) > 1 else DEFAULT_DOSSIER
|
||||
|
||||
# Vérifier quels modèles sont disponibles
|
||||
available = []
|
||||
unavailable = []
|
||||
for model in MODELS_TO_TEST:
|
||||
if check_model_available(model):
|
||||
available.append(model)
|
||||
else:
|
||||
unavailable.append(model)
|
||||
|
||||
print(f"Modèles disponibles: {len(available)}/{len(MODELS_TO_TEST)}")
|
||||
for m in available:
|
||||
print(f" ✓ {m}")
|
||||
for m in unavailable:
|
||||
print(f" ✗ {m} (non trouvé)")
|
||||
|
||||
if not available:
|
||||
print("ERREUR: Aucun modèle local disponible")
|
||||
sys.exit(1)
|
||||
|
||||
print(f"\nDossier de test: {dossier_name}")
|
||||
print(f"Début du benchmark...\n")
|
||||
|
||||
results = []
|
||||
for model in available:
|
||||
try:
|
||||
result = run_benchmark_for_model(model, dossier_name)
|
||||
results.append(result)
|
||||
|
||||
# Sauvegarder les résultats intermédiaires
|
||||
output_path = Path(__file__).parent / "output" / "benchmark_cpam_tim.json"
|
||||
output_path.parent.mkdir(parents=True, exist_ok=True)
|
||||
with open(output_path, "w", encoding="utf-8") as f:
|
||||
json.dump(results, f, ensure_ascii=False, indent=2, default=str)
|
||||
|
||||
except Exception as e:
|
||||
logger.exception("Erreur fatale pour %s", model)
|
||||
results.append({"model": model, "error": str(e)})
|
||||
|
||||
# Résumé comparatif
|
||||
print_summary(results)
|
||||
|
||||
# Sauvegarder les résultats finaux
|
||||
output_path = Path(__file__).parent / "output" / "benchmark_cpam_tim.json"
|
||||
with open(output_path, "w", encoding="utf-8") as f:
|
||||
json.dump(results, f, ensure_ascii=False, indent=2, default=str)
|
||||
print(f"\nRésultats détaillés sauvegardés dans: {output_path}")
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
@@ -1,472 +0,0 @@
|
||||
#!/usr/bin/env python3
|
||||
"""Comparaison qualité CPAM : multi-modèles sur 3 dossiers.
|
||||
|
||||
Génère la contre-argumentation CPAM avec plusieurs modèles et compare :
|
||||
- Longueur et densité des arguments
|
||||
- Présence des 3 axes (médical, asymétrie, réglementaire)
|
||||
- Citations de preuves du dossier
|
||||
- Références aux sources RAG
|
||||
- Mots-clés d'asymétrie d'information
|
||||
"""
|
||||
|
||||
import json
|
||||
import re
|
||||
import sys
|
||||
import time
|
||||
from pathlib import Path
|
||||
|
||||
import requests
|
||||
|
||||
STRUCTURED_DIR = Path("output/structured")
|
||||
OLLAMA_URL = "http://localhost:11434"
|
||||
MODELS = ["gemma3:12b-v2"] # 12b avec nouveau prompt nuancé
|
||||
TIMEOUTS = {
|
||||
"gemma3:12b": 120,
|
||||
"gemma3:27b": 300,
|
||||
"qwen3:14b": 180,
|
||||
"mistral-small3.2:24b": 300,
|
||||
}
|
||||
|
||||
# 3 dossiers variés : DP+DA, DAS long, DP court
|
||||
TEST_DOSSIERS = [
|
||||
"183_23087212", # DP+DA contestés
|
||||
"228_23176885", # DAS seul, arg long (1921c)
|
||||
"153_23102610", # DP seul, arg court
|
||||
]
|
||||
|
||||
|
||||
def load_dossier(dossier_name: str) -> dict | None:
|
||||
dossier_dir = STRUCTURED_DIR / dossier_name
|
||||
if not dossier_dir.exists():
|
||||
return None
|
||||
for f in list(dossier_dir.glob("*_fusionne_cim10.json")) + sorted(dossier_dir.glob("*_cim10.json")):
|
||||
return json.loads(f.read_text())
|
||||
return None
|
||||
|
||||
|
||||
def build_prompt(data: dict, controle: dict, sources: list[dict]) -> str:
|
||||
"""Reconstruit le prompt CPAM (identique au pipeline)."""
|
||||
# Import du vrai builder pour garantir la cohérence
|
||||
sys.path.insert(0, str(Path(__file__).parent))
|
||||
from src.config import ControleCPAM, DossierMedical
|
||||
from src.control.cpam_response import _build_cpam_prompt
|
||||
|
||||
dossier = DossierMedical.model_validate(data)
|
||||
ctrl = ControleCPAM.model_validate(controle)
|
||||
return _build_cpam_prompt(dossier, ctrl, sources)
|
||||
|
||||
|
||||
# Modèles incompatibles avec format:json d'Ollama (mode thinking)
|
||||
NO_FORMAT_JSON_MODELS = {"qwen3:14b", "qwen3:8b", "qwen3:32b"}
|
||||
|
||||
|
||||
def _parse_json_from_text(raw: str) -> dict | None:
|
||||
"""Parse du JSON depuis une réponse brute (avec ou sans markdown)."""
|
||||
text = raw.strip()
|
||||
# Retirer bloc markdown ```json ... ```
|
||||
if text.startswith("```"):
|
||||
first_nl = text.find("\n")
|
||||
if first_nl != -1:
|
||||
text = text[first_nl + 1:]
|
||||
if text.rstrip().endswith("```"):
|
||||
text = text.rstrip()[:-3]
|
||||
text = text.strip()
|
||||
# Essayer tel quel
|
||||
try:
|
||||
return json.loads(text)
|
||||
except json.JSONDecodeError:
|
||||
pass
|
||||
# Trouver le premier { ... dernier }
|
||||
brace_start = text.find("{")
|
||||
brace_end = text.rfind("}")
|
||||
if brace_start != -1 and brace_end > brace_start:
|
||||
try:
|
||||
return json.loads(text[brace_start:brace_end + 1])
|
||||
except json.JSONDecodeError:
|
||||
pass
|
||||
return None
|
||||
|
||||
|
||||
def call_ollama(prompt: str, model: str) -> tuple[dict | None, float, str]:
|
||||
"""Appelle Ollama et retourne (parsed_json, duration_s, raw_text)."""
|
||||
timeout = TIMEOUTS.get(model, 180)
|
||||
use_format_json = model not in NO_FORMAT_JSON_MODELS
|
||||
|
||||
# Pour Qwen3 : ajouter /no_think pour désactiver le mode thinking
|
||||
actual_prompt = prompt
|
||||
if model in NO_FORMAT_JSON_MODELS:
|
||||
actual_prompt = prompt + "\n/no_think"
|
||||
|
||||
payload = {
|
||||
"model": model,
|
||||
"prompt": actual_prompt,
|
||||
"stream": False,
|
||||
"options": {
|
||||
"temperature": 0.1,
|
||||
"num_predict": 4000,
|
||||
},
|
||||
}
|
||||
if use_format_json:
|
||||
payload["format"] = "json"
|
||||
|
||||
t0 = time.time()
|
||||
try:
|
||||
response = requests.post(
|
||||
f"{OLLAMA_URL}/api/generate",
|
||||
json=payload,
|
||||
timeout=timeout,
|
||||
)
|
||||
response.raise_for_status()
|
||||
duration = time.time() - t0
|
||||
raw = response.json().get("response", "")
|
||||
|
||||
parsed = _parse_json_from_text(raw)
|
||||
return parsed, duration, raw
|
||||
|
||||
except json.JSONDecodeError:
|
||||
duration = time.time() - t0
|
||||
return None, duration, raw
|
||||
except Exception as e:
|
||||
duration = time.time() - t0
|
||||
return None, duration, str(e)
|
||||
|
||||
|
||||
def compute_metrics(parsed: dict | None) -> dict:
|
||||
"""Calcule les métriques de qualité."""
|
||||
if parsed is None:
|
||||
return {"valid_json": False}
|
||||
|
||||
full_text = json.dumps(parsed, ensure_ascii=False)
|
||||
|
||||
# 3 axes présents ?
|
||||
has_med = bool(parsed.get("contre_arguments_medicaux"))
|
||||
has_asym = bool(parsed.get("contre_arguments_asymetrie"))
|
||||
has_regl = bool(parsed.get("contre_arguments_reglementaires"))
|
||||
has_3axes = has_med and has_asym and has_regl
|
||||
|
||||
# Longueurs par axe
|
||||
len_med = len(str(parsed.get("contre_arguments_medicaux", "")))
|
||||
len_asym = len(str(parsed.get("contre_arguments_asymetrie", "")))
|
||||
len_regl = len(str(parsed.get("contre_arguments_reglementaires", "")))
|
||||
len_total_args = len_med + len_asym + len_regl
|
||||
|
||||
# Fallback ancien format
|
||||
if not has_3axes:
|
||||
len_total_args = max(len_total_args, len(str(parsed.get("contre_arguments", ""))))
|
||||
|
||||
# Preuves du dossier
|
||||
preuves = parsed.get("preuves_dossier", [])
|
||||
n_preuves = len(preuves) if isinstance(preuves, list) else 0
|
||||
|
||||
# Références structurées
|
||||
refs = parsed.get("references", [])
|
||||
n_refs = len(refs) if isinstance(refs, list) else 0
|
||||
|
||||
# Références avec citation verbatim
|
||||
n_refs_citation = 0
|
||||
if isinstance(refs, list):
|
||||
for r in refs:
|
||||
if isinstance(r, dict) and r.get("citation") and len(str(r["citation"])) > 20:
|
||||
n_refs_citation += 1
|
||||
|
||||
# Mots-clés d'asymétrie
|
||||
full_lower = full_text.lower()
|
||||
asymetrie_kw = [
|
||||
"biologie", "imagerie", "scanner", "irm", "échographie",
|
||||
"traitement", "médicament", "posologie",
|
||||
"asymétrie", "non transmis", "n'avait pas", "n'a pas eu accès",
|
||||
"imc", "antécédent", "crp", "hémoglobine", "leucocytes",
|
||||
]
|
||||
n_asymetrie = sum(1 for kw in asymetrie_kw if kw in full_lower)
|
||||
|
||||
# Points d'accord réels
|
||||
accord = str(parsed.get("points_accord", ""))
|
||||
accord_real = bool(accord) and accord.lower().strip() not in ("aucun", "aucun.", "n/a", "")
|
||||
|
||||
# Conclusion non vide
|
||||
conclusion = str(parsed.get("conclusion", ""))
|
||||
has_conclusion = len(conclusion) > 20
|
||||
|
||||
return {
|
||||
"valid_json": True,
|
||||
"has_3axes": has_3axes,
|
||||
"len_med": len_med,
|
||||
"len_asym": len_asym,
|
||||
"len_regl": len_regl,
|
||||
"len_total_args": len_total_args,
|
||||
"n_preuves": n_preuves,
|
||||
"n_refs": n_refs,
|
||||
"n_refs_citation": n_refs_citation,
|
||||
"n_asymetrie": n_asymetrie,
|
||||
"accord_real": accord_real,
|
||||
"has_conclusion": has_conclusion,
|
||||
"total_len": len(full_text),
|
||||
}
|
||||
|
||||
|
||||
def model_key(model: str) -> str:
|
||||
"""Clé courte pour un modèle (ex: 'gemma3:12b' → 'gemma3_12b')."""
|
||||
return model.replace(":", "_").replace(".", "_")
|
||||
|
||||
|
||||
def print_multi_model(results: list[dict], models: list[str]):
|
||||
"""Affiche la comparaison multi-modèles."""
|
||||
W = 140
|
||||
col_w = 18
|
||||
print("\n" + "=" * W)
|
||||
print(f"COMPARAISON CPAM : {' vs '.join(models)}")
|
||||
print("=" * W)
|
||||
|
||||
metric_labels = [
|
||||
("Durée (s)", "duration", True),
|
||||
("3 axes", "has_3axes", False),
|
||||
("Args médicaux", "len_med", False),
|
||||
("Args asymétrie", "len_asym", False),
|
||||
("Args réglementaires", "len_regl", False),
|
||||
("Total args (car.)", "len_total_args", False),
|
||||
("Preuves structurées", "n_preuves", False),
|
||||
("Références RAG", "n_refs", False),
|
||||
("Refs verbatim", "n_refs_citation", False),
|
||||
("Mots-clés asymétrie", "n_asymetrie", False),
|
||||
("Points d'accord", "accord_real", False),
|
||||
("Conclusion étayée", "has_conclusion", False),
|
||||
("Longueur totale", "total_len", False),
|
||||
]
|
||||
|
||||
for r in results:
|
||||
print(f"\n{'─' * W}")
|
||||
print(f" {r['dossier']} / OGC {r['ogc']} — {r['titre']}")
|
||||
print(f" Argument CPAM : {r['arg_len']} car. | Prompt : {r['prompt_len']} car.")
|
||||
print(f"{'─' * W}")
|
||||
|
||||
# Vérifier validité
|
||||
all_valid = True
|
||||
for m in models:
|
||||
mk = model_key(m)
|
||||
metrics = r.get(f"metrics_{mk}", {})
|
||||
if not metrics.get("valid_json", False):
|
||||
dur = r.get(f"duration_{mk}", 0)
|
||||
print(f" {m} : JSON INVALIDE ({dur:.1f}s)")
|
||||
all_valid = False
|
||||
if not all_valid:
|
||||
continue
|
||||
|
||||
# Header
|
||||
header = f" {'Métrique':<25}"
|
||||
for m in models:
|
||||
short = m.split(":")[0][:6] + ":" + m.split(":")[-1] if ":" in m else m[:col_w]
|
||||
header += f" {short:>{col_w}}"
|
||||
print(header)
|
||||
print(f" {'─' * (25 + (col_w + 1) * len(models))}")
|
||||
|
||||
for label, key, is_duration in metric_labels:
|
||||
row = f" {label:<25}"
|
||||
for m in models:
|
||||
mk = model_key(m)
|
||||
if is_duration:
|
||||
val = r.get(f"duration_{mk}", 0)
|
||||
row += f" {val:>{col_w - 1}.1f}s"
|
||||
else:
|
||||
metrics = r.get(f"metrics_{mk}", {})
|
||||
val = metrics.get(key, 0)
|
||||
if isinstance(val, bool):
|
||||
row += f" {'Oui' if val else 'Non':>{col_w}}"
|
||||
else:
|
||||
row += f" {val:>{col_w}}"
|
||||
print(row)
|
||||
|
||||
# Synthèse globale
|
||||
print(f"\n{'=' * W}")
|
||||
print("SYNTHÈSE GLOBALE")
|
||||
print(f"{'=' * W}")
|
||||
|
||||
# Filtrer les résultats valides pour tous les modèles
|
||||
valid = []
|
||||
for r in results:
|
||||
all_ok = all(r.get(f"metrics_{model_key(m)}", {}).get("valid_json", False) for m in models)
|
||||
if all_ok:
|
||||
valid.append(r)
|
||||
|
||||
if not valid:
|
||||
print(" Aucun résultat valide pour tous les modèles.")
|
||||
return
|
||||
|
||||
n = len(valid)
|
||||
print(f" Dossiers comparés : {n}")
|
||||
|
||||
# Header synthèse
|
||||
header = f"\n {'Métrique':<25}"
|
||||
for m in models:
|
||||
short = m.split(":")[0][:6] + ":" + m.split(":")[-1] if ":" in m else m[:col_w]
|
||||
header += f" {short:>{col_w}}"
|
||||
header += f" {'Meilleur':>{col_w}}"
|
||||
print(header)
|
||||
print(f" {'─' * (25 + (col_w + 1) * (len(models) + 1))}")
|
||||
|
||||
# Durée
|
||||
row = f" {'Durée moy. (s)':<25}"
|
||||
dur_vals = {}
|
||||
for m in models:
|
||||
mk = model_key(m)
|
||||
avg_dur = sum(r.get(f"duration_{mk}", 0) for r in valid) / n
|
||||
dur_vals[m] = avg_dur
|
||||
row += f" {avg_dur:>{col_w - 1}.1f}s"
|
||||
best = min(dur_vals, key=dur_vals.get)
|
||||
row += f" {best:>{col_w}}"
|
||||
print(row)
|
||||
|
||||
# Métriques (higher is better)
|
||||
for label, key in [
|
||||
("Total args (car.)", "len_total_args"),
|
||||
("Preuves structurées", "n_preuves"),
|
||||
("Références RAG", "n_refs"),
|
||||
("Refs verbatim", "n_refs_citation"),
|
||||
("Mots-clés asymétrie", "n_asymetrie"),
|
||||
]:
|
||||
row = f" {label:<25}"
|
||||
vals = {}
|
||||
for m in models:
|
||||
mk = model_key(m)
|
||||
avg_val = sum(r.get(f"metrics_{mk}", {}).get(key, 0) for r in valid) / n
|
||||
vals[m] = avg_val
|
||||
row += f" {avg_val:>{col_w}.1f}"
|
||||
best = max(vals, key=vals.get)
|
||||
row += f" {best:>{col_w}}"
|
||||
print(row)
|
||||
|
||||
# Booléens (count True)
|
||||
for label, key in [
|
||||
("3 axes", "has_3axes"),
|
||||
("Points d'accord", "accord_real"),
|
||||
]:
|
||||
row = f" {label:<25}"
|
||||
vals = {}
|
||||
for m in models:
|
||||
mk = model_key(m)
|
||||
cnt = sum(1 for r in valid if r.get(f"metrics_{mk}", {}).get(key, False))
|
||||
vals[m] = cnt
|
||||
row += f" {f'{cnt}/{n}':>{col_w}}"
|
||||
best = max(vals, key=vals.get)
|
||||
row += f" {best:>{col_w}}"
|
||||
print(row)
|
||||
|
||||
# Durées totales
|
||||
print()
|
||||
fastest = min(models, key=lambda m: sum(r.get(f"duration_{model_key(m)}", 0) for r in valid))
|
||||
fastest_dur = sum(r.get(f"duration_{model_key(fastest)}", 0) for r in valid)
|
||||
for m in models:
|
||||
mk = model_key(m)
|
||||
total = sum(r.get(f"duration_{mk}", 0) for r in valid)
|
||||
ratio = total / fastest_dur if fastest_dur > 0 else 0
|
||||
print(f" {m:<25} total={total:.0f}s (x{ratio:.1f})")
|
||||
print()
|
||||
|
||||
|
||||
def main():
|
||||
# Charger les résultats précédents (all_models)
|
||||
prev_file = Path("output/compare_cpam_all_models.json")
|
||||
prev_data = {}
|
||||
if prev_file.exists():
|
||||
for entry in json.loads(prev_file.read_text()):
|
||||
prev_data[entry["dossier"]] = entry
|
||||
|
||||
# On compare l'ancien 12b (ancien prompt) vs le nouveau 12b-v2 (nouveau prompt nuancé)
|
||||
# + 27b comme référence nuance
|
||||
ref_models = ["gemma3:12b", "gemma3:27b"]
|
||||
all_models = ref_models + MODELS
|
||||
print("=" * 100)
|
||||
print(f"Comparaison qualité CPAM : {' / '.join(all_models)}")
|
||||
print(f"Dossiers : {', '.join(TEST_DOSSIERS)}")
|
||||
print(f"Test : gemma3:12b avec NOUVEAU prompt nuancé (v2)")
|
||||
print(f"Résultats précédents : {'oui' if prev_data else 'non'}")
|
||||
print("=" * 100)
|
||||
|
||||
results = []
|
||||
|
||||
for dossier_name in TEST_DOSSIERS:
|
||||
data = load_dossier(dossier_name)
|
||||
if not data:
|
||||
print(f"\nERREUR : {dossier_name} non trouvé")
|
||||
continue
|
||||
|
||||
controles = [c for c in data.get("controles_cpam", []) if c.get("arg_ucr")]
|
||||
if not controles:
|
||||
print(f"\nERREUR : {dossier_name} — pas de contrôle CPAM")
|
||||
continue
|
||||
|
||||
controle = controles[0]
|
||||
sources = [
|
||||
{
|
||||
"document": s.get("document", ""),
|
||||
"page": s.get("page"),
|
||||
"code": s.get("code"),
|
||||
"extrait": s.get("extrait", ""),
|
||||
}
|
||||
for s in controle.get("sources_reponse", [])
|
||||
]
|
||||
|
||||
prompt = build_prompt(data, controle, sources)
|
||||
|
||||
print(f"\n[{dossier_name}] OGC {controle['numero_ogc']} — {controle.get('titre', '')}")
|
||||
print(f" Prompt : {len(prompt)} car. | Arg CPAM : {len(controle.get('arg_ucr', ''))} car.")
|
||||
|
||||
result = {
|
||||
"dossier": dossier_name,
|
||||
"ogc": controle["numero_ogc"],
|
||||
"titre": controle.get("titre", ""),
|
||||
"arg_len": len(controle.get("arg_ucr", "")),
|
||||
"prompt_len": len(prompt),
|
||||
}
|
||||
|
||||
# Réutiliser les résultats précédents pour les modèles de référence
|
||||
prev = prev_data.get(dossier_name)
|
||||
if prev:
|
||||
for old_model in ref_models:
|
||||
mk = model_key(old_model)
|
||||
result[f"duration_{mk}"] = prev.get(f"duration_{mk}", 0)
|
||||
result[f"metrics_{mk}"] = prev.get(f"metrics_{mk}", {})
|
||||
result[f"response_{mk}"] = prev.get(f"response_{mk}")
|
||||
dur = result[f"duration_{mk}"]
|
||||
is_valid = result[f"metrics_{mk}"].get("valid_json", False)
|
||||
print(f" → {old_model} ... (précédent) {'OK' if is_valid else 'FAIL'} ({dur:.1f}s)")
|
||||
|
||||
# Tester le 12b-v2 (nouveau prompt) — appelle gemma3:12b avec le prompt modifié
|
||||
for model_label in MODELS:
|
||||
mk = model_key(model_label)
|
||||
actual_model = "gemma3:12b" # même modèle, nouveau prompt
|
||||
print(f" → {model_label} (nouveau prompt) ...", end=" ", flush=True)
|
||||
parsed, dur, raw = call_ollama(prompt, actual_model)
|
||||
status = "OK" if parsed else "FAIL"
|
||||
print(f"{status} ({dur:.1f}s)")
|
||||
|
||||
result[f"duration_{mk}"] = dur
|
||||
result[f"metrics_{mk}"] = compute_metrics(parsed)
|
||||
result[f"response_{mk}"] = parsed
|
||||
|
||||
results.append(result)
|
||||
|
||||
# Affichage
|
||||
print_multi_model(results, all_models)
|
||||
|
||||
# Sauvegarde
|
||||
output_file = Path("output/compare_cpam_prompt_v2.json")
|
||||
output_file.parent.mkdir(parents=True, exist_ok=True)
|
||||
save_data = []
|
||||
for r in results:
|
||||
entry = {
|
||||
"dossier": r["dossier"],
|
||||
"ogc": r["ogc"],
|
||||
"titre": r["titre"],
|
||||
}
|
||||
for m in all_models:
|
||||
mk = model_key(m)
|
||||
entry[f"duration_{mk}"] = r.get(f"duration_{mk}", 0)
|
||||
entry[f"metrics_{mk}"] = r.get(f"metrics_{mk}", {})
|
||||
entry[f"response_{mk}"] = r.get(f"response_{mk}")
|
||||
save_data.append(entry)
|
||||
output_file.write_text(json.dumps(save_data, ensure_ascii=False, indent=2))
|
||||
print(f"Résultats sauvegardés dans {output_file}")
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
4521
config/coding_dictionary.json
Normal file
4521
config/coding_dictionary.json
Normal file
File diff suppressed because it is too large
Load Diff
437
config/completude_rules.yaml
Normal file
437
config/completude_rules.yaml
Normal file
@@ -0,0 +1,437 @@
|
||||
# Règles de complétude documentaire DIM
|
||||
# Pour chaque famille diagnostique : éléments obligatoires/recommandés
|
||||
# qui doivent être présents dans le dossier pour justifier le code.
|
||||
#
|
||||
# Catégories : biologie | imagerie | document | acte | clinique
|
||||
# Importance : obligatoire | recommande
|
||||
# match_type : bio (biologie_cle.test), imagerie (imagerie.type), document (doc_types),
|
||||
# clinique (sejour.imc/poids/taille), acte (actes_ccam)
|
||||
#
|
||||
# Seuils (optionnel) : confrontation valeur ↔ diagnostic
|
||||
# type: below | above | range
|
||||
# value / value_m / value_f / range_min / range_max
|
||||
# message_ok / message_ko
|
||||
|
||||
version: 2
|
||||
|
||||
# --- Règles par préfixe CIM-10 ---
|
||||
diagnostics:
|
||||
|
||||
denutrition:
|
||||
prefixes: ["E43", "E44", "E46"]
|
||||
libelle_famille: "Dénutrition"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: Albumine
|
||||
match_bio: ["albumine"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Albumine exigée par la CPAM pour valider une dénutrition (critère ATIH)"
|
||||
seuil:
|
||||
code_filter: "E43"
|
||||
type: below
|
||||
value: 30
|
||||
message_ok: "Albumine < 30 g/L confirme la dénutrition sévère"
|
||||
message_ko: "Albumine ≥ 30 g/L : dénutrition sévère non confirmée biologiquement"
|
||||
- categorie: biologie
|
||||
element: Albumine
|
||||
match_bio: ["albumine"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Albumine exigée pour dénutrition modérée"
|
||||
seuil:
|
||||
code_filter: "E44"
|
||||
type: range
|
||||
range_min: 30
|
||||
range_max: 35
|
||||
message_ok: "Albumine entre 30-35 g/L confirme la dénutrition modérée"
|
||||
message_ko: "Albumine hors plage 30-35 g/L pour dénutrition modérée"
|
||||
- categorie: clinique
|
||||
element: IMC
|
||||
match_clinique: imc
|
||||
importance: obligatoire
|
||||
impact_cpam: "IMC nécessaire pour classifier le degré de dénutrition"
|
||||
seuil:
|
||||
code_filter: "E43"
|
||||
type: below
|
||||
value: 18.5
|
||||
message_ok: "IMC < 18.5 confirme la dénutrition sévère"
|
||||
message_ko: "IMC ≥ 18.5 : dénutrition sévère non confirmée"
|
||||
- categorie: clinique
|
||||
element: IMC
|
||||
match_clinique: imc
|
||||
importance: obligatoire
|
||||
impact_cpam: "IMC nécessaire pour dénutrition modérée"
|
||||
seuil:
|
||||
code_filter: "E44"
|
||||
type: range
|
||||
range_min: 18.5
|
||||
range_max: 21
|
||||
message_ok: "IMC entre 18.5-21 confirme la dénutrition modérée"
|
||||
message_ko: "IMC hors plage 18.5-21 pour dénutrition modérée"
|
||||
- categorie: biologie
|
||||
element: Préalbumine
|
||||
match_bio: ["prealbumine", "préalbumine", "transthyretine", "transthyrétine"]
|
||||
importance: recommande
|
||||
impact_cpam: "Renforce la preuve de dénutrition si albumine limite"
|
||||
|
||||
anemie:
|
||||
prefixes: ["D50", "D62", "D63", "D64"]
|
||||
libelle_famille: "Anémie"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: Hémoglobine
|
||||
match_bio: ["hemoglobine", "hémoglobine", "hb"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Hémoglobine indispensable pour confirmer et qualifier une anémie"
|
||||
seuil:
|
||||
type: below
|
||||
value_m: 13
|
||||
value_f: 12
|
||||
message_ok: "Hémoglobine basse confirme l'anémie"
|
||||
message_ko: "Hémoglobine normale : anémie non confirmée biologiquement"
|
||||
- categorie: biologie
|
||||
element: Ferritine
|
||||
match_bio: ["ferritine"]
|
||||
importance: recommande
|
||||
impact_cpam: "Permet de typer l'anémie (carentielle vs inflammatoire)"
|
||||
- categorie: biologie
|
||||
element: VGM
|
||||
match_bio: ["vgm", "volume globulaire moyen"]
|
||||
importance: recommande
|
||||
impact_cpam: "Oriente l'étiologie (microcytaire/macrocytaire)"
|
||||
|
||||
insuffisance_renale:
|
||||
prefixes: ["N17", "N18", "N19"]
|
||||
libelle_famille: "Insuffisance rénale"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: Créatinine
|
||||
match_bio: ["creatinine", "créatinine", "creat"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Créatinine obligatoire pour confirmer une insuffisance rénale"
|
||||
seuil:
|
||||
type: above
|
||||
value: 120
|
||||
message_ok: "Créatinine > 120 µmol/L confirme l'insuffisance rénale"
|
||||
message_ko: "Créatinine ≤ 120 µmol/L : IR non confirmée biologiquement"
|
||||
- categorie: biologie
|
||||
element: DFG
|
||||
match_bio: ["dfg", "clairance", "dfge", "débit de filtration"]
|
||||
importance: recommande
|
||||
impact_cpam: "Permet de stadifier l'IR selon KDIGO"
|
||||
- categorie: biologie
|
||||
element: Urée
|
||||
match_bio: ["uree", "urée"]
|
||||
importance: recommande
|
||||
impact_cpam: "Élément complémentaire de la fonction rénale"
|
||||
|
||||
sepsis:
|
||||
prefixes: ["A40", "A41"]
|
||||
libelle_famille: "Sepsis / Septicémie"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: CRP
|
||||
match_bio: ["crp", "proteine c reactive", "protéine c réactive"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Marqueur inflammatoire essentiel pour documenter un sepsis"
|
||||
seuil:
|
||||
type: above
|
||||
value: 50
|
||||
message_ok: "CRP > 50 mg/L confirme le syndrome inflammatoire"
|
||||
message_ko: "CRP ≤ 50 mg/L : syndrome inflammatoire non significatif"
|
||||
- categorie: biologie
|
||||
element: Leucocytes
|
||||
match_bio: ["leucocytes", "gb", "globules blancs"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Leucocytose ou leucopénie attendue dans le sepsis"
|
||||
seuil:
|
||||
type: outside_range
|
||||
range_min: 4
|
||||
range_max: 10
|
||||
message_ok: "Leucocytes hors norme (< 4 ou > 10 G/L) : compatible avec sepsis"
|
||||
message_ko: "Leucocytes normaux (4-10 G/L) : sepsis non confirmé biologiquement"
|
||||
- categorie: biologie
|
||||
element: Procalcitonine
|
||||
match_bio: ["procalcitonine", "pct"]
|
||||
importance: recommande
|
||||
impact_cpam: "Marqueur spécifique d'infection bactérienne, renforce la preuve"
|
||||
- categorie: biologie
|
||||
element: Hémocultures
|
||||
match_bio: ["hemoculture", "hémoculture", "hemocultures", "hémocultures"]
|
||||
importance: recommande
|
||||
impact_cpam: "Documentation bactériologique du sepsis"
|
||||
|
||||
troubles_electrolytiques:
|
||||
prefixes: ["E87"]
|
||||
libelle_famille: "Troubles électrolytiques"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: Sodium
|
||||
match_bio: ["sodium", "natremie", "natrémie", "na"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Ionogramme obligatoire pour justifier un trouble électrolytique"
|
||||
seuil:
|
||||
type: below
|
||||
value: 135
|
||||
message_ok: "Sodium < 135 mmol/L confirme l'hyponatrémie"
|
||||
message_ko: "Sodium ≥ 135 mmol/L : hyponatrémie non confirmée"
|
||||
- categorie: biologie
|
||||
element: Potassium
|
||||
match_bio: ["potassium", "kaliemie", "kaliémie", "k"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Ionogramme obligatoire pour justifier un trouble électrolytique"
|
||||
seuil:
|
||||
type: outside_range
|
||||
range_min: 3.5
|
||||
range_max: 5.0
|
||||
message_ok: "Potassium hors norme : trouble confirmé"
|
||||
message_ko: "Potassium normal (3.5-5.0) : trouble non confirmé"
|
||||
|
||||
diabete:
|
||||
prefixes: ["E10", "E11"]
|
||||
libelle_famille: "Diabète"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: HbA1c
|
||||
match_bio: ["hba1c", "hemoglobine glyquee", "hémoglobine glyquée"]
|
||||
importance: recommande
|
||||
impact_cpam: "HbA1c attendue pour documenter l'équilibre glycémique"
|
||||
- categorie: biologie
|
||||
element: Glycémie
|
||||
match_bio: ["glycemie", "glycémie", "glucose"]
|
||||
importance: recommande
|
||||
impact_cpam: "Glycémie de base pour confirmer le diagnostic"
|
||||
|
||||
pancreatite:
|
||||
prefixes: ["K85"]
|
||||
libelle_famille: "Pancréatite aiguë"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: Lipasémie
|
||||
match_bio: ["lipase", "lipasemie", "lipasémie"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Lipase > 3N est le critère diagnostique de référence"
|
||||
seuil:
|
||||
type: above
|
||||
value: 180
|
||||
message_ok: "Lipase > 180 UI/L (3× la normale) confirme la pancréatite"
|
||||
message_ko: "Lipase ≤ 180 UI/L : critère diagnostique non atteint"
|
||||
- categorie: imagerie
|
||||
element: Scanner abdominal
|
||||
match_imagerie: ["scanner", "tdm", "tomodensitometrie"]
|
||||
importance: recommande
|
||||
impact_cpam: "Scanner recommandé pour évaluer la sévérité (Balthazar)"
|
||||
|
||||
embolie_pulmonaire:
|
||||
prefixes: ["I26"]
|
||||
libelle_famille: "Embolie pulmonaire"
|
||||
items:
|
||||
- categorie: imagerie
|
||||
element: Angioscanner thoracique
|
||||
match_imagerie: ["angioscanner", "scanner", "tdm", "angiotdm"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Imagerie indispensable pour confirmer une EP"
|
||||
- categorie: biologie
|
||||
element: D-dimères
|
||||
match_bio: ["d-dimeres", "d-dimères", "ddimeres", "d dimeres"]
|
||||
importance: recommande
|
||||
impact_cpam: "D-dimères utiles si négatifs pour exclure, non suffisants seuls"
|
||||
|
||||
tumeurs_malignes:
|
||||
prefixes: ["C"]
|
||||
libelle_famille: "Tumeur maligne"
|
||||
items:
|
||||
- categorie: document
|
||||
element: ANAPATH
|
||||
match_document: ["anapath", "anatomopathologie", "biopsie"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Compte-rendu anatomopathologique exigé pour tout code C (tumeur maligne)"
|
||||
|
||||
pathologies_hepatiques:
|
||||
prefixes: ["K70", "K71", "K72", "K73", "K74", "K75", "K76", "K77"]
|
||||
libelle_famille: "Pathologie hépatique"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: ASAT
|
||||
match_bio: ["asat", "got", "aspartate aminotransferase"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Bilan hépatique obligatoire pour documenter une atteinte hépatique"
|
||||
seuil:
|
||||
type: above
|
||||
value: 40
|
||||
message_ok: "ASAT > 40 UI/L confirme la cytolyse hépatique"
|
||||
message_ko: "ASAT ≤ 40 UI/L : cytolyse non confirmée"
|
||||
- categorie: biologie
|
||||
element: ALAT
|
||||
match_bio: ["alat", "gpt", "alanine aminotransferase"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Bilan hépatique obligatoire"
|
||||
seuil:
|
||||
type: above
|
||||
value: 40
|
||||
message_ok: "ALAT > 40 UI/L confirme la cytolyse hépatique"
|
||||
message_ko: "ALAT ≤ 40 UI/L : cytolyse non confirmée"
|
||||
- categorie: biologie
|
||||
element: Bilirubine
|
||||
match_bio: ["bilirubine", "bili"]
|
||||
importance: recommande
|
||||
impact_cpam: "Bilirubine renforce la documentation d'une atteinte hépatique"
|
||||
|
||||
obesite:
|
||||
prefixes: ["E66"]
|
||||
libelle_famille: "Obésité"
|
||||
items:
|
||||
- categorie: clinique
|
||||
element: IMC
|
||||
match_clinique: imc
|
||||
importance: obligatoire
|
||||
impact_cpam: "IMC ≥ 30 indispensable pour coder une obésité"
|
||||
seuil:
|
||||
type: above
|
||||
value: 30
|
||||
message_ok: "IMC ≥ 30 confirme l'obésité"
|
||||
message_ko: "IMC < 30 : obésité non confirmée"
|
||||
- categorie: clinique
|
||||
element: Poids
|
||||
match_clinique: poids
|
||||
importance: obligatoire
|
||||
impact_cpam: "Poids nécessaire pour calculer l'IMC"
|
||||
|
||||
insuffisance_cardiaque:
|
||||
prefixes: ["I50"]
|
||||
libelle_famille: "Insuffisance cardiaque"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: BNP / NT-proBNP
|
||||
match_bio: ["bnp", "nt-probnp", "ntprobnp", "pro-bnp"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "BNP/NT-proBNP attendu pour confirmer une insuffisance cardiaque"
|
||||
seuil:
|
||||
type: above
|
||||
value: 100
|
||||
message_ok: "BNP > 100 pg/mL (ou NT-proBNP > 300) confirme l'IC"
|
||||
message_ko: "BNP ≤ 100 pg/mL : IC non confirmée biologiquement"
|
||||
- categorie: imagerie
|
||||
element: Échographie cardiaque
|
||||
match_imagerie: ["echographie cardiaque", "échocardiographie", "echo coeur", "ett", "eto"]
|
||||
importance: recommande
|
||||
impact_cpam: "ETT recommandée pour documenter la FEVG"
|
||||
|
||||
# --- 8 NOUVELLES FAMILLES ---
|
||||
|
||||
avc_ait:
|
||||
prefixes: ["I60", "I61", "I62", "I63", "I64", "G45"]
|
||||
libelle_famille: "AVC / AIT"
|
||||
items:
|
||||
- categorie: imagerie
|
||||
element: Scanner/IRM cérébral
|
||||
match_imagerie: ["scanner cerebral", "irm cerebral", "irm cérébral", "scanner cérébral", "tdm cerebral", "tdm cérébral", "irm encephalique", "irm encéphalique"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Imagerie cérébrale indispensable pour confirmer un AVC/AIT"
|
||||
- categorie: biologie
|
||||
element: ECG
|
||||
match_bio: ["ecg", "electrocardiogramme", "électrocardiogramme"]
|
||||
importance: recommande
|
||||
impact_cpam: "ECG recommandé pour rechercher une cause cardioembolique"
|
||||
|
||||
idm:
|
||||
prefixes: ["I21", "I22"]
|
||||
libelle_famille: "Infarctus du myocarde"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: Troponine
|
||||
match_bio: ["troponine", "tnc", "tni", "tnt", "troponine i", "troponine t", "troponine us"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Troponine obligatoire pour confirmer un IDM"
|
||||
seuil:
|
||||
type: above
|
||||
value: 0.04
|
||||
message_ok: "Troponine > 0.04 confirme la nécrose myocardique"
|
||||
message_ko: "Troponine ≤ 0.04 : IDM non confirmé biologiquement"
|
||||
- categorie: biologie
|
||||
element: ECG
|
||||
match_bio: ["ecg", "electrocardiogramme", "électrocardiogramme"]
|
||||
importance: recommande
|
||||
impact_cpam: "ECG recommandé pour caractériser l'IDM (ST+/ST-)"
|
||||
- categorie: imagerie
|
||||
element: Coronarographie
|
||||
match_imagerie: ["coronarographie", "coronaro", "coro"]
|
||||
importance: recommande
|
||||
impact_cpam: "Coronarographie recommandée pour documenter les lésions"
|
||||
|
||||
pneumopathie:
|
||||
prefixes: ["J12", "J13", "J14", "J15", "J16", "J17", "J18"]
|
||||
libelle_famille: "Pneumopathie"
|
||||
items:
|
||||
- categorie: imagerie
|
||||
element: Radio/Scanner thoracique
|
||||
match_imagerie: ["radio thorax", "radiographie thoracique", "scanner thoracique", "tdm thoracique", "rx thorax", "radio pulmonaire"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Imagerie thoracique indispensable pour confirmer une pneumopathie"
|
||||
- categorie: biologie
|
||||
element: CRP
|
||||
match_bio: ["crp", "proteine c reactive", "protéine c réactive"]
|
||||
importance: recommande
|
||||
impact_cpam: "CRP recommandée pour documenter le syndrome inflammatoire"
|
||||
|
||||
tvp:
|
||||
prefixes: ["I80"]
|
||||
libelle_famille: "Thrombose veineuse profonde"
|
||||
items:
|
||||
- categorie: imagerie
|
||||
element: Écho-doppler veineux
|
||||
match_imagerie: ["echo-doppler", "écho-doppler", "echo doppler", "écho doppler", "doppler veineux", "echodoppler"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Écho-doppler veineux indispensable pour confirmer une TVP"
|
||||
|
||||
insuffisance_respiratoire:
|
||||
prefixes: ["J96"]
|
||||
libelle_famille: "Insuffisance respiratoire"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: Gaz du sang
|
||||
match_bio: ["gaz du sang", "gazometrie", "gazométrie", "gds", "pao2", "paco2"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Gazométrie artérielle obligatoire pour confirmer une insuffisance respiratoire"
|
||||
|
||||
fractures:
|
||||
prefixes: ["S02", "S12", "S22", "S32", "S42", "S52", "S62", "S72", "S82", "S92"]
|
||||
libelle_famille: "Fracture"
|
||||
items:
|
||||
- categorie: imagerie
|
||||
element: Imagerie osseuse
|
||||
match_imagerie: ["radio", "radiographie", "scanner", "tdm", "irm", "rx"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Imagerie indispensable pour confirmer une fracture"
|
||||
|
||||
infection_urinaire:
|
||||
prefixes: ["N39.0"]
|
||||
libelle_famille: "Infection urinaire"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: ECBU
|
||||
match_bio: ["ecbu", "examen cytobacteriologique", "examen cytobactériologique"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "ECBU obligatoire pour documenter une infection urinaire"
|
||||
|
||||
fa_flutter:
|
||||
prefixes: ["I48"]
|
||||
libelle_famille: "Fibrillation auriculaire / Flutter"
|
||||
items:
|
||||
- categorie: biologie
|
||||
element: ECG
|
||||
match_bio: ["ecg", "electrocardiogramme", "électrocardiogramme"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "ECG obligatoire pour documenter une FA/flutter"
|
||||
|
||||
# --- Règles par préfixe CCAM (actes) ---
|
||||
actes:
|
||||
|
||||
chirurgie:
|
||||
description: "Acte chirurgical nécessitant un CRO"
|
||||
prefixes: ["H", "J", "K", "L"]
|
||||
items:
|
||||
- categorie: document
|
||||
element: CRO
|
||||
match_document: ["cro", "compte rendu operatoire", "compte-rendu opératoire"]
|
||||
importance: obligatoire
|
||||
impact_cpam: "Compte-rendu opératoire obligatoire pour tout acte chirurgical"
|
||||
@@ -26,9 +26,9 @@ mutual_exclusions:
|
||||
|
||||
incompatibilities:
|
||||
- pair: ["E66", "E40", "E41", "E42", "E43", "E44", "E45", "E46"]
|
||||
atih_ref: "Guide Méthodologique MCO : Incompatibilité clinique Obésité / Dénutrition"
|
||||
message: "Obésité (E66) et Dénutrition/Malnutrition (E40-E46) sont cliniquement incompatibles"
|
||||
severity: "HARD"
|
||||
atih_ref: "HAS/FFN nov 2021 : un patient obèse peut être dénutri"
|
||||
message: "Obésité et Dénutrition coexistent — vérifier critères HAS 2021 (perte de poids, sarcopénie, albumine)"
|
||||
severity: "MEDIUM"
|
||||
|
||||
- pair: ["I10", "I95"]
|
||||
atih_ref: "Guide Méthodologique MCO : Incohérence Hypertension / Hypotension sur le même séjour"
|
||||
|
||||
@@ -1,107 +1,92 @@
|
||||
version: 1
|
||||
|
||||
# Catalogue "socle" de règles.
|
||||
#
|
||||
# Objectif : piloter (sans toucher au code) :
|
||||
# - l'activation/désactivation de règles (vetos + décisions)
|
||||
# - éventuellement un forçage de sévérité pour un VETO
|
||||
#
|
||||
# Important : si une règle n'est pas listée ici, elle est considérée activée.
|
||||
# (=> comportement historique conservé)
|
||||
|
||||
packs:
|
||||
vetos_core:
|
||||
enabled: true
|
||||
rules:
|
||||
VETO-02:
|
||||
enabled: true
|
||||
description: "Code sans preuve exploitable"
|
||||
description: Code sans preuve exploitable
|
||||
VETO-03:
|
||||
enabled: true
|
||||
description: "Conditionnel / négation / contradictions dans la preuve"
|
||||
description: Conditionnel / négation / contradictions dans la preuve
|
||||
VETO-06:
|
||||
enabled: true
|
||||
description: "DP dupliqué dans les DAS"
|
||||
description: DP dupliqué dans les DAS
|
||||
VETO-07:
|
||||
enabled: true
|
||||
description: "Doublons DAS"
|
||||
description: Doublons DAS
|
||||
VETO-09:
|
||||
enabled: true
|
||||
description: "Contradiction biologique (plaquettes/créat)"
|
||||
# force_severity: "HARD" # Optionnel : forcer la sévérité globale
|
||||
description: Contradiction biologique (plaquettes/créat)
|
||||
VETO-12:
|
||||
enabled: true
|
||||
description: "Sur-confiance (high sans preuve)"
|
||||
description: Sur-confiance (high sans preuve)
|
||||
VETO-15:
|
||||
enabled: true
|
||||
description: "Preuve issue d'un score/test (risque de sur-codage)"
|
||||
description: Preuve issue d'un score/test (risque de sur-codage)
|
||||
VETO-16:
|
||||
enabled: true
|
||||
description: "Heuristique libellé→code (hors-sujet probable)"
|
||||
description: Heuristique libellé→code (hors-sujet probable)
|
||||
VETO-17:
|
||||
enabled: true
|
||||
description: "Preuve biologique manquante => NEED_INFO (non bloquant)"
|
||||
|
||||
description: Preuve biologique manquante => NEED_INFO (non bloquant)
|
||||
decisions_core:
|
||||
enabled: true
|
||||
rules:
|
||||
RULE-D50-NEEDS-IRON:
|
||||
enabled: true
|
||||
description: "D50 sans preuve martiale => downgrade D64.9 + NEED_INFO"
|
||||
description: D50 sans preuve martiale => downgrade D64.9 + NEED_INFO
|
||||
RULE-D69.6-PLT-NORMAL:
|
||||
enabled: true
|
||||
description: "D69.6 incompatible avec plaquettes normales => ruled_out (barré)"
|
||||
description: D69.6 incompatible avec plaquettes normales => ruled_out (barré)
|
||||
RULE-DAS-TO-DP:
|
||||
enabled: true
|
||||
description: "DAS promu en DP si aucun DP extrait — sélection par pertinence/confiance/spécificité"
|
||||
description: DAS promu en DP si aucun DP extrait — sélection par pertinence/confiance/spécificité
|
||||
RULE-CPAM-CORRECTION-LOOP:
|
||||
enabled: true
|
||||
description: "Boucle de correction quand validation adversariale score ≤ 5/10"
|
||||
|
||||
description: Boucle de correction quand validation adversariale score ≤ 5/10
|
||||
bio_electrolytes:
|
||||
enabled: true
|
||||
rules:
|
||||
RULE-E87.1-NA-NORMAL:
|
||||
enabled: true
|
||||
description: "E87.1 suggérée mais Na normal => ruled_out"
|
||||
description: E87.1 suggérée mais Na normal => ruled_out
|
||||
RULE-E87.1-MISSING-NA:
|
||||
enabled: true
|
||||
description: "E87.1 suggérée mais Na absent => NEED_INFO"
|
||||
description: E87.1 suggérée mais Na absent => NEED_INFO
|
||||
RULE-E87.5-K-NORMAL:
|
||||
enabled: true
|
||||
description: "E87.5 suggérée mais K normal => ruled_out"
|
||||
description: E87.5 suggérée mais K normal => ruled_out
|
||||
RULE-E87.5-MISSING-K:
|
||||
enabled: true
|
||||
description: "E87.5 suggérée mais K absent => NEED_INFO"
|
||||
description: E87.5 suggérée mais K absent => NEED_INFO
|
||||
RULE-E87.6-K-NORMAL:
|
||||
enabled: true
|
||||
description: "E87.6 suggérée mais K normal => ruled_out"
|
||||
description: E87.6 suggérée mais K normal => ruled_out
|
||||
RULE-E87.6-MISSING-K:
|
||||
enabled: true
|
||||
description: "E87.6 suggérée mais K absent => NEED_INFO"
|
||||
|
||||
description: E87.6 suggérée mais K absent => NEED_INFO
|
||||
atih_core:
|
||||
enabled: true
|
||||
rules:
|
||||
VETO-20:
|
||||
enabled: true
|
||||
description: "Z code interdit en DP (sauf whitelist Z09/Z51/Z54/Z75/Z03/Z04/Z38/Z50/Z08)"
|
||||
description: Z code interdit en DP (sauf whitelist Z09/Z51/Z54/Z75/Z03/Z04/Z38/Z50/Z08)
|
||||
VETO-21:
|
||||
enabled: true
|
||||
description: "Code R (symptôme) en DP → CMD 23, tarification faible"
|
||||
description: Code R (symptôme) en DP → CMD 23, tarification faible
|
||||
VETO-22:
|
||||
enabled: true
|
||||
description: "Même catégorie CIM-10 3 chars en DP + DAS (redondance)"
|
||||
description: Même catégorie CIM-10 3 chars en DP + DAS (redondance)
|
||||
VETO-23:
|
||||
enabled: true
|
||||
description: "Exclusions mutuelles (E10/E11 diabète, I10/I11-I13 HTA)"
|
||||
description: Exclusions mutuelles (E10/E11 diabète, I10/I11-I13 HTA)
|
||||
VETO-24:
|
||||
enabled: true
|
||||
description: "Lésion traumatique (S/T) sans cause externe (V/W/X/Y)"
|
||||
|
||||
description: Lésion traumatique (S/T) sans cause externe (V/W/X/Y)
|
||||
placeholders_future:
|
||||
enabled: false
|
||||
rules:
|
||||
RULE-PDF-PROTECTED-NEED_INFO:
|
||||
enabled: false
|
||||
description: "PDF protégé => NEED_INFO (à implémenter si besoin)"
|
||||
description: PDF protégé => NEED_INFO (à implémenter si besoin)
|
||||
|
||||
Binary file not shown.
Binary file not shown.
@@ -1,738 +0,0 @@
|
||||
#!/usr/bin/env python3
|
||||
"""
|
||||
extract_t2a_llm.py — Extracteur T2A généraliste via OCR + LLM (Ollama)
|
||||
|
||||
Entrée : PDF (scanné ou natif) de document T2A (décision UCR, notification CPAM, rapport ARS…)
|
||||
Sortie : Fichier Excel (.xlsx) avec les données structurées
|
||||
|
||||
Architecture :
|
||||
PDF → OCR/texte natif → Détection type (1 appel LLM) → Extraction bloc par bloc (N appels LLM) → Excel
|
||||
|
||||
Usage :
|
||||
python extract_t2a_llm.py FICHIER.pdf [--model gemma3:27b-it-qat] [--output out.xlsx] [--verbose]
|
||||
"""
|
||||
from __future__ import annotations
|
||||
|
||||
import argparse
|
||||
import json
|
||||
import re
|
||||
import sys
|
||||
import time
|
||||
from pathlib import Path
|
||||
|
||||
import pymupdf
|
||||
import requests
|
||||
from openpyxl import Workbook
|
||||
from openpyxl.styles import Font, PatternFill, Alignment, Border, Side
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 0. Normalisation texte OCR
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
def normalize_text(text: str) -> str:
|
||||
"""Normalise les apostrophes, guillemets et espaces issus de l'OCR."""
|
||||
text = text.replace("\u2018", "'").replace("\u2019", "'")
|
||||
text = text.replace("\u201C", '"').replace("\u201D", '"')
|
||||
text = text.replace("\u00AB", '"').replace("\u00BB", '"')
|
||||
text = text.replace("''", "'")
|
||||
text = text.replace("\u00A0", " ").replace("\u202F", " ")
|
||||
text = re.sub(r"\bF'UCR\b", "l'UCR", text)
|
||||
text = re.sub(r"\bl''UCR\b", "l'UCR", text)
|
||||
return text
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 1. OCR / Extraction texte (docTR — deep learning, GPU)
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
_doctr_model = None
|
||||
|
||||
|
||||
def _get_doctr_model():
|
||||
"""Lazy-init du modèle docTR (chargé une seule fois, GPU si VRAM libre, sinon CPU)."""
|
||||
global _doctr_model
|
||||
if _doctr_model is not None:
|
||||
return _doctr_model
|
||||
|
||||
from doctr.models import ocr_predictor
|
||||
|
||||
print(" Chargement du modèle docTR (première utilisation)...")
|
||||
t0 = time.time()
|
||||
_doctr_model = ocr_predictor(
|
||||
det_arch="db_resnet50",
|
||||
reco_arch="crnn_vgg16_bn",
|
||||
pretrained=True,
|
||||
)
|
||||
|
||||
# Déplacer sur GPU si disponible et assez de VRAM libre
|
||||
try:
|
||||
import torch
|
||||
if torch.cuda.is_available():
|
||||
free_vram = torch.cuda.mem_get_info()[0] / (1024 ** 3)
|
||||
if free_vram > 1.0:
|
||||
try:
|
||||
_doctr_model = _doctr_model.cuda()
|
||||
print(f" docTR sur GPU ({torch.cuda.get_device_name(0)}, "
|
||||
f"{free_vram:.1f} Go libres) — {time.time() - t0:.1f}s")
|
||||
except torch.cuda.OutOfMemoryError:
|
||||
_doctr_model = _doctr_model.cpu()
|
||||
torch.cuda.empty_cache()
|
||||
print(f" GPU VRAM insuffisante, docTR sur CPU — {time.time() - t0:.1f}s")
|
||||
else:
|
||||
print(f" GPU VRAM trop basse ({free_vram:.1f} Go libres, Ollama ?), "
|
||||
f"docTR sur CPU — {time.time() - t0:.1f}s")
|
||||
else:
|
||||
print(f" docTR sur CPU — {time.time() - t0:.1f}s")
|
||||
except ImportError:
|
||||
print(f" docTR sur CPU — {time.time() - t0:.1f}s")
|
||||
|
||||
return _doctr_model
|
||||
|
||||
|
||||
def ocr_pdf(pdf_path: str, dpi: int = 300) -> str:
|
||||
"""Extrait le texte du PDF : texte natif si disponible, sinon OCR docTR (GPU)."""
|
||||
doc = pymupdf.open(pdf_path)
|
||||
total = len(doc)
|
||||
|
||||
# Détection : texte natif vs scanné (sur la première page)
|
||||
first_page_text = doc[0].get_text() if total > 0 else ""
|
||||
is_native = len(first_page_text.strip()) > 100
|
||||
|
||||
if is_native:
|
||||
print(" Mode : extraction texte natif (pymupdf)")
|
||||
full_text = []
|
||||
for i, page in enumerate(doc):
|
||||
print(f" Extraction page {i+1}/{total}...", end="\r")
|
||||
full_text.append(page.get_text())
|
||||
print(f" Extraction terminée : {total} pages. ")
|
||||
return normalize_text("\n\n".join(full_text))
|
||||
|
||||
# OCR docTR
|
||||
print(" Mode : OCR docTR (deep learning, GPU)")
|
||||
from doctr.io import DocumentFile
|
||||
|
||||
model = _get_doctr_model()
|
||||
|
||||
print(f" Lecture du PDF ({total} pages)...")
|
||||
doc_pages = DocumentFile.from_pdf(pdf_path)
|
||||
print(f" OCR en cours sur {len(doc_pages)} pages...")
|
||||
|
||||
t0 = time.time()
|
||||
result = model(doc_pages)
|
||||
elapsed = time.time() - t0
|
||||
print(f" OCR terminé : {total} pages en {elapsed:.1f}s "
|
||||
f"({elapsed/total:.1f}s/page)")
|
||||
|
||||
full_text = result.render()
|
||||
return normalize_text(full_text)
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 2. Client Ollama
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
NO_FORMAT_JSON_PREFIXES = ("qwen3", "qwen2.5")
|
||||
|
||||
OLLAMA_URL = "http://localhost:11434"
|
||||
|
||||
|
||||
def parse_json_response(raw: str) -> dict | list | None:
|
||||
"""Parse une réponse JSON, en gérant les blocs markdown et le texte parasite."""
|
||||
text = raw.strip()
|
||||
|
||||
# Supprimer les blocs <think>...</think> (Qwen3)
|
||||
text = re.sub(r"<think>.*?</think>", "", text, flags=re.DOTALL).strip()
|
||||
|
||||
# Supprimer les blocs markdown ```json ... ```
|
||||
if text.startswith("```"):
|
||||
first_nl = text.find("\n")
|
||||
if first_nl != -1:
|
||||
text = text[first_nl + 1:]
|
||||
if text.rstrip().endswith("```"):
|
||||
text = text.rstrip()[:-3]
|
||||
text = text.strip()
|
||||
|
||||
# Tentative directe
|
||||
try:
|
||||
return json.loads(text)
|
||||
except json.JSONDecodeError:
|
||||
pass
|
||||
|
||||
# Extraire le premier objet ou tableau JSON
|
||||
for start_char, end_char in [("{", "}"), ("[", "]")]:
|
||||
start = text.find(start_char)
|
||||
if start == -1:
|
||||
continue
|
||||
depth = 0
|
||||
for i in range(start, len(text)):
|
||||
if text[i] == start_char:
|
||||
depth += 1
|
||||
elif text[i] == end_char:
|
||||
depth -= 1
|
||||
if depth == 0:
|
||||
try:
|
||||
return json.loads(text[start:i + 1])
|
||||
except json.JSONDecodeError:
|
||||
break
|
||||
|
||||
return None
|
||||
|
||||
|
||||
def call_ollama(
|
||||
prompt: str,
|
||||
model: str,
|
||||
temperature: float = 0.1,
|
||||
max_tokens: int = 4000,
|
||||
timeout: int = 120,
|
||||
verbose: bool = False,
|
||||
) -> dict | list | None:
|
||||
"""Appelle Ollama. Utilise l'API chat avec think=false pour Qwen3."""
|
||||
is_qwen = any(model.startswith(p) for p in NO_FORMAT_JSON_PREFIXES)
|
||||
|
||||
if is_qwen:
|
||||
# API chat + think:false pour Qwen3 (pas de format JSON natif)
|
||||
endpoint = f"{OLLAMA_URL}/api/chat"
|
||||
body = {
|
||||
"model": model,
|
||||
"messages": [{"role": "user", "content": prompt}],
|
||||
"stream": False,
|
||||
"think": False,
|
||||
"options": {
|
||||
"temperature": temperature,
|
||||
"num_predict": max_tokens,
|
||||
},
|
||||
}
|
||||
else:
|
||||
# API generate + format JSON natif pour les autres modèles
|
||||
endpoint = f"{OLLAMA_URL}/api/generate"
|
||||
body = {
|
||||
"model": model,
|
||||
"prompt": prompt,
|
||||
"stream": False,
|
||||
"format": "json",
|
||||
"options": {
|
||||
"temperature": temperature,
|
||||
"num_predict": max_tokens,
|
||||
},
|
||||
}
|
||||
|
||||
if verbose:
|
||||
print(f"\n--- PROMPT ({model}) ---")
|
||||
print(prompt[:500] + ("..." if len(prompt) > 500 else ""))
|
||||
print("--- FIN PROMPT ---\n")
|
||||
|
||||
for attempt in range(2):
|
||||
try:
|
||||
t0 = time.time()
|
||||
response = requests.post(endpoint, json=body, timeout=timeout)
|
||||
elapsed = time.time() - t0
|
||||
response.raise_for_status()
|
||||
data = response.json()
|
||||
|
||||
# Extraire le texte de la réponse selon l'API utilisée
|
||||
if is_qwen:
|
||||
raw = data.get("message", {}).get("content", "")
|
||||
else:
|
||||
raw = data.get("response", "")
|
||||
|
||||
if verbose:
|
||||
print(f"--- RÉPONSE ({elapsed:.1f}s) ---")
|
||||
print(raw[:500] + ("..." if len(raw) > 500 else ""))
|
||||
print("--- FIN RÉPONSE ---\n")
|
||||
|
||||
result = parse_json_response(raw)
|
||||
if result is not None:
|
||||
return result
|
||||
if attempt == 0:
|
||||
print(f" [warn] JSON invalide, retry... (raw: {raw[:100]})")
|
||||
except requests.ConnectionError:
|
||||
print("[ERREUR] Ollama non disponible sur localhost:11434")
|
||||
sys.exit(1)
|
||||
except requests.Timeout:
|
||||
print(f" [warn] Timeout ({timeout}s) — tentative {attempt + 1}/2")
|
||||
if attempt == 1:
|
||||
return None
|
||||
except requests.RequestException as e:
|
||||
print(f" [warn] Erreur requête : {e}")
|
||||
return None
|
||||
|
||||
return None
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 3. Phase 1 — Détection du type de document
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
PROMPT_PHASE1 = """\
|
||||
Tu es un expert en codage PMSI et contrôle T2A. Analyse le début de ce document et identifie sa structure.
|
||||
|
||||
TEXTE (début du document) :
|
||||
---
|
||||
{text_preview}
|
||||
---
|
||||
|
||||
Réponds UNIQUEMENT en JSON avec ces champs :
|
||||
{{
|
||||
"type_document": "decision_ucr | notification_cpam | rapport_controle | autre",
|
||||
"organisme": "nom de l'organisme (CPAM, UCR, ARS...)",
|
||||
"date_document": "date au format YYYY-MM-DD si trouvée, sinon vide",
|
||||
"objet": "résumé en une phrase de l'objet du document",
|
||||
"separateur_blocs": "regex Python pour séparer les dossiers individuels (ex: OGC \\\\d+ :)",
|
||||
"colonnes_detectees": ["liste des champs/colonnes détectés dans la structure"]
|
||||
}}
|
||||
|
||||
IMPORTANT :
|
||||
- Le separateur_blocs doit être un regex Python valide
|
||||
- Il doit capturer le motif qui sépare chaque dossier/cas individuel
|
||||
- Si c'est un document UCR, le séparateur est typiquement "OGC \\\\d+ :"
|
||||
- Si tu ne trouves pas de séparateur clair, mets une chaîne vide ""
|
||||
"""
|
||||
|
||||
|
||||
def detect_document_type(full_text: str, model: str, timeout: int, verbose: bool) -> dict:
|
||||
"""Phase 1 : détection du type de document via LLM."""
|
||||
preview = full_text[:3000]
|
||||
prompt = PROMPT_PHASE1.format(text_preview=preview)
|
||||
result = call_ollama(prompt, model=model, timeout=timeout, verbose=verbose)
|
||||
if result is None:
|
||||
print(" [warn] Phase 1 : détection échouée, utilisation des valeurs par défaut")
|
||||
return {
|
||||
"type_document": "autre",
|
||||
"organisme": "",
|
||||
"date_document": "",
|
||||
"objet": "",
|
||||
"separateur_blocs": "",
|
||||
"colonnes_detectees": [],
|
||||
}
|
||||
return result
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 4. Découpage en blocs
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
def split_into_blocks(full_text: str, separator_pattern: str) -> list[str]:
|
||||
"""Découpe le texte en blocs logiques (dossiers individuels)."""
|
||||
blocks = []
|
||||
|
||||
# Tentative avec le séparateur détecté par le LLM
|
||||
if separator_pattern:
|
||||
try:
|
||||
regex = re.compile(separator_pattern, re.MULTILINE | re.IGNORECASE)
|
||||
parts = regex.split(full_text)
|
||||
# Recombiner : le séparateur fait partie du bloc suivant
|
||||
matches = list(regex.finditer(full_text))
|
||||
if len(matches) >= 3:
|
||||
for i, match in enumerate(matches):
|
||||
start = match.start()
|
||||
end = matches[i + 1].start() if i + 1 < len(matches) else len(full_text)
|
||||
block = full_text[start:end].strip()
|
||||
if block:
|
||||
blocks.append(block)
|
||||
print(f" Découpage par séparateur : {len(blocks)} blocs trouvés")
|
||||
return blocks
|
||||
else:
|
||||
print(f" [warn] Séparateur '{separator_pattern}' → seulement {len(matches)} blocs, fallback")
|
||||
except re.error as e:
|
||||
print(f" [warn] Regex invalide '{separator_pattern}' : {e}, fallback")
|
||||
|
||||
# Fallback : découpage par taille (~6000 chars, chevauchement 500)
|
||||
chunk_size = 6000
|
||||
overlap = 500
|
||||
text_len = len(full_text)
|
||||
if text_len <= chunk_size:
|
||||
return [full_text]
|
||||
|
||||
pos = 0
|
||||
while pos < text_len:
|
||||
end = min(pos + chunk_size, text_len)
|
||||
# Essayer de couper à une fin de ligne
|
||||
if end < text_len:
|
||||
newline_pos = full_text.rfind("\n", pos + chunk_size - 200, end + 200)
|
||||
if newline_pos > pos:
|
||||
end = newline_pos
|
||||
blocks.append(full_text[pos:end].strip())
|
||||
pos = end - overlap if end < text_len else text_len
|
||||
|
||||
print(f" Découpage par taille : {len(blocks)} blocs ({chunk_size} chars, chevauchement {overlap})")
|
||||
return blocks
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 5. Phase 2 — Extraction bloc par bloc
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
SCHEMA_FIELDS = """\
|
||||
Champs à extraire (JSON) — remplis chaque champ ou laisse une chaîne vide "" si non trouvé :
|
||||
- "champ": numéro de champ (entier, 0 si non trouvé)
|
||||
- "ogc": numéro OGC / numéro de dossier (entier, 0 si non trouvé)
|
||||
- "type_desaccord": type de désaccord — "DP", "DAS", "DP + DAS", ou ""
|
||||
- "code_etablissement": code(s) CIM-10 de l'établissement (ex: "G40.0 + F10.2")
|
||||
- "libelle_etablissement": libellé(s) correspondant aux codes établissement
|
||||
- "code_controleurs": code(s) CIM-10 des contrôleurs (ou "non repris")
|
||||
- "libelle_controleurs": libellé(s) correspondant aux codes contrôleurs
|
||||
- "codes_retenus_final": code(s) finalement retenus par l'UCR/la décision
|
||||
- "decision": classification — "Favorable établissement", "Défavorable établissement", "Mixte", ou "Indéterminé"
|
||||
* "Favorable établissement" = la décision retient l'avis/le codage de l'établissement
|
||||
* "Défavorable établissement" = la décision confirme l'avis des contrôleurs
|
||||
* "Mixte" = partiellement favorable et partiellement défavorable
|
||||
* "Indéterminé" = impossible à classifier clairement
|
||||
- "texte_decision_complet": texte intégral de la décision/conclusion
|
||||
- "resume_motif": résumé en 1-2 phrases du motif de la décision
|
||||
- "regles_citees": règles de codage citées (ex: "T3, T7")
|
||||
- "references_guide": références documentaires (guide méthodologique, fascicules ATIH, avis Agora…)
|
||||
- "ghm_mentionne": tous les GHM mentionnés (ex: "05M09 / 05M092")
|
||||
- "ghs_mentionne": tous les GHS mentionnés
|
||||
- "ghm_final": le GHM final retenu
|
||||
- "ghs_final": le GHS final retenu
|
||||
- "impact_groupage": impact sur le groupage — "Mieux valorisé", "Pas de changement", ou ""
|
||||
"""
|
||||
|
||||
PROMPT_PHASE2 = """\
|
||||
Tu es un expert en codage PMSI et contrôle T2A.
|
||||
|
||||
CONTEXTE DOCUMENT :
|
||||
- Type : {type_document}
|
||||
- Organisme : {organisme}
|
||||
- Objet : {objet}
|
||||
|
||||
BLOC DE TEXTE À ANALYSER :
|
||||
---
|
||||
{block_text}
|
||||
---
|
||||
|
||||
CONSIGNES :
|
||||
1. Extrais les informations de chaque dossier/cas présent dans ce bloc.
|
||||
2. Si le bloc contient UN SEUL dossier, retourne un objet JSON.
|
||||
3. Si le bloc contient PLUSIEURS dossiers, retourne une LISTE d'objets JSON.
|
||||
4. Si le bloc ne contient aucun dossier exploitable (en-tête, pied de page, texte administratif sans cas individuel), retourne : {{"skip": true}}
|
||||
|
||||
{schema}
|
||||
|
||||
IMPORTANT :
|
||||
- Sois précis sur les codes CIM-10 (format X00.0)
|
||||
- Pour la décision, analyse attentivement le texte : "retient l'avis de l'établissement" = Favorable, "confirme l'avis des contrôleurs" = Défavorable
|
||||
- Ne laisse aucun champ sans clé, utilise "" pour les valeurs inconnues
|
||||
- Retourne UNIQUEMENT du JSON valide, sans texte avant ou après
|
||||
"""
|
||||
|
||||
|
||||
def extract_block(
|
||||
block_text: str,
|
||||
doc_info: dict,
|
||||
model: str,
|
||||
timeout: int,
|
||||
verbose: bool,
|
||||
) -> list[dict]:
|
||||
"""Extrait les données d'un bloc via LLM. Retourne une liste de dossiers."""
|
||||
prompt = PROMPT_PHASE2.format(
|
||||
type_document=doc_info.get("type_document", "autre"),
|
||||
organisme=doc_info.get("organisme", ""),
|
||||
objet=doc_info.get("objet", ""),
|
||||
block_text=block_text[:8000], # Limiter la taille
|
||||
schema=SCHEMA_FIELDS,
|
||||
)
|
||||
result = call_ollama(prompt, model=model, max_tokens=4000, timeout=timeout, verbose=verbose)
|
||||
if result is None:
|
||||
return []
|
||||
|
||||
# Skip
|
||||
if isinstance(result, dict) and result.get("skip"):
|
||||
return []
|
||||
|
||||
# Normaliser en liste
|
||||
if isinstance(result, dict):
|
||||
items = [result]
|
||||
elif isinstance(result, list):
|
||||
items = [r for r in result if isinstance(r, dict) and not r.get("skip")]
|
||||
else:
|
||||
return []
|
||||
|
||||
return items
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 6. Fusion et dédoublonnage
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
# Mapping clés LLM (snake_case) → clés Excel (TitleCase)
|
||||
KEY_MAP = {
|
||||
"champ": "Champ",
|
||||
"ogc": "OGC",
|
||||
"type_desaccord": "Type_desaccord",
|
||||
"code_etablissement": "Code_etablissement",
|
||||
"libelle_etablissement": "Libelle_etablissement",
|
||||
"code_controleurs": "Code_controleurs",
|
||||
"libelle_controleurs": "Libelle_controleurs",
|
||||
"codes_retenus_final": "Codes_retenus_final",
|
||||
"decision": "Decision",
|
||||
"texte_decision_complet": "Texte_decision_complet",
|
||||
"resume_motif": "Resume_motif",
|
||||
"regles_citees": "Regles_citees",
|
||||
"references_guide": "References_guide",
|
||||
"ghm_mentionne": "GHM_mentionne",
|
||||
"ghs_mentionne": "GHS_mentionne",
|
||||
"ghm_final": "GHM_final",
|
||||
"ghs_final": "GHS_final",
|
||||
"impact_groupage": "Impact_groupage",
|
||||
}
|
||||
|
||||
|
||||
def normalize_row(raw: dict) -> dict:
|
||||
"""Convertit les clés LLM en clés Excel et normalise les types."""
|
||||
row = {}
|
||||
for llm_key, excel_key in KEY_MAP.items():
|
||||
val = raw.get(llm_key, raw.get(excel_key, ""))
|
||||
# Convertir en int pour Champ et OGC
|
||||
if excel_key in ("Champ", "OGC"):
|
||||
try:
|
||||
val = int(val) if val else 0
|
||||
except (ValueError, TypeError):
|
||||
val = 0
|
||||
elif not isinstance(val, str):
|
||||
val = str(val) if val is not None else ""
|
||||
row[excel_key] = val
|
||||
return row
|
||||
|
||||
|
||||
def merge_and_deduplicate(all_items: list[dict]) -> list[dict]:
|
||||
"""Fusionne, déduplique par OGC, et trie les résultats."""
|
||||
rows = [normalize_row(item) for item in all_items]
|
||||
|
||||
# Filtrer les lignes sans contenu utile
|
||||
rows = [r for r in rows if r["OGC"] > 0 or r["Code_etablissement"] or r["Decision"]]
|
||||
|
||||
# Dédoublonnage par OGC (garder la version la plus complète)
|
||||
seen: dict[int, dict] = {}
|
||||
deduped: list[dict] = []
|
||||
for r in rows:
|
||||
key = r["OGC"]
|
||||
if key == 0:
|
||||
deduped.append(r)
|
||||
continue
|
||||
if key in seen:
|
||||
old = seen[key]
|
||||
old_score = sum(1 for v in old.values() if v and v != 0)
|
||||
new_score = sum(1 for v in r.values() if v and v != 0)
|
||||
if new_score > old_score:
|
||||
deduped = [x for x in deduped if x["OGC"] != key]
|
||||
deduped.append(r)
|
||||
seen[key] = r
|
||||
else:
|
||||
seen[key] = r
|
||||
deduped.append(r)
|
||||
|
||||
deduped.sort(key=lambda r: (r["Champ"], r["OGC"]))
|
||||
return deduped
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 7. Export Excel
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
HEADERS = [
|
||||
"Champ", "OGC", "Type_desaccord",
|
||||
"Code_etablissement", "Libelle_etablissement",
|
||||
"Code_controleurs", "Libelle_controleurs",
|
||||
"Codes_retenus_final",
|
||||
"Decision", "Texte_decision_complet", "Resume_motif",
|
||||
"Regles_citees", "References_guide",
|
||||
"GHM_mentionne", "GHS_mentionne", "GHM_final", "GHS_final",
|
||||
"Impact_groupage",
|
||||
]
|
||||
|
||||
HEADER_LABELS = [
|
||||
"Champ", "N° OGC", "Type désaccord",
|
||||
"Code(s) Établissement", "Libellé Établissement",
|
||||
"Code(s) Contrôleurs", "Libellé Contrôleurs",
|
||||
"Code(s) retenus (final)",
|
||||
"Décision UCR", "Texte décision complet", "Résumé du motif",
|
||||
"Règles codage citées", "Références (guide, fascicules, avis)",
|
||||
"GHM mentionné(s)", "GHS mentionné(s)", "GHM final", "GHS final",
|
||||
"Impact groupage",
|
||||
]
|
||||
|
||||
|
||||
def write_excel(rows: list[dict], output_path: str):
|
||||
"""Écrit les résultats dans un fichier Excel (feuille unique)."""
|
||||
wb = Workbook()
|
||||
ws = wb.active
|
||||
ws.title = "Décisions UCR"
|
||||
|
||||
# Styles
|
||||
header_font = Font(bold=True, color="FFFFFF", size=11)
|
||||
header_fill = PatternFill(start_color="2F5496", end_color="2F5496", fill_type="solid")
|
||||
header_align = Alignment(horizontal="center", vertical="center", wrap_text=True)
|
||||
thin_border = Border(
|
||||
left=Side(style="thin"), right=Side(style="thin"),
|
||||
top=Side(style="thin"), bottom=Side(style="thin"),
|
||||
)
|
||||
|
||||
fav_fill = PatternFill(start_color="C6EFCE", end_color="C6EFCE", fill_type="solid")
|
||||
defav_fill = PatternFill(start_color="FFC7CE", end_color="FFC7CE", fill_type="solid")
|
||||
mixte_fill = PatternFill(start_color="FFEB9C", end_color="FFEB9C", fill_type="solid")
|
||||
|
||||
# En-têtes
|
||||
for col, label in enumerate(HEADER_LABELS, 1):
|
||||
cell = ws.cell(row=1, column=col, value=label)
|
||||
cell.font = header_font
|
||||
cell.fill = header_fill
|
||||
cell.alignment = header_align
|
||||
cell.border = thin_border
|
||||
|
||||
# Données
|
||||
for row_idx, data in enumerate(rows, 2):
|
||||
for col_idx, key in enumerate(HEADERS, 1):
|
||||
val = data.get(key, "")
|
||||
cell = ws.cell(row=row_idx, column=col_idx, value=val)
|
||||
cell.border = thin_border
|
||||
cell.alignment = Alignment(vertical="top", wrap_text=True)
|
||||
|
||||
# Colorer la colonne Décision
|
||||
dec_col = HEADERS.index("Decision") + 1
|
||||
decision_cell = ws.cell(row=row_idx, column=dec_col)
|
||||
dv = str(decision_cell.value or "")
|
||||
if "Favorable" in dv and "Défavorable" not in dv:
|
||||
decision_cell.fill = fav_fill
|
||||
elif "Défavorable" in dv:
|
||||
decision_cell.fill = defav_fill
|
||||
elif "Mixte" in dv:
|
||||
decision_cell.fill = mixte_fill
|
||||
|
||||
# Largeurs de colonnes
|
||||
col_widths = {
|
||||
"Champ": 8, "OGC": 8, "Type_desaccord": 14,
|
||||
"Code_etablissement": 22, "Libelle_etablissement": 40,
|
||||
"Code_controleurs": 22, "Libelle_controleurs": 40,
|
||||
"Codes_retenus_final": 22,
|
||||
"Decision": 24, "Texte_decision_complet": 80,
|
||||
"Resume_motif": 60,
|
||||
"Regles_citees": 16, "References_guide": 50,
|
||||
"GHM_mentionne": 16, "GHS_mentionne": 16,
|
||||
"GHM_final": 12, "GHS_final": 10,
|
||||
"Impact_groupage": 20,
|
||||
}
|
||||
for i, key in enumerate(HEADERS, 1):
|
||||
ws.column_dimensions[ws.cell(row=1, column=i).column_letter].width = col_widths.get(key, 15)
|
||||
|
||||
# Filtre automatique + freeze
|
||||
last_col_letter = ws.cell(row=1, column=len(HEADERS)).column_letter
|
||||
ws.auto_filter.ref = f"A1:{last_col_letter}{len(rows)+1}"
|
||||
ws.freeze_panes = "A2"
|
||||
|
||||
wb.save(output_path)
|
||||
print(f"Excel enregistré : {output_path}")
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 8. CLI / Main
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
def main():
|
||||
parser = argparse.ArgumentParser(
|
||||
description="Extracteur T2A généraliste via OCR + LLM (Ollama)",
|
||||
)
|
||||
parser.add_argument("pdf", help="Fichier PDF à traiter")
|
||||
parser.add_argument("--model", default="gemma3:27b-it-qat",
|
||||
help="Modèle Ollama (défaut: gemma3:27b-it-qat)")
|
||||
parser.add_argument("--timeout", type=int, default=120,
|
||||
help="Timeout par appel LLM en secondes (défaut: 120)")
|
||||
parser.add_argument("--output", default=None,
|
||||
help="Fichier Excel de sortie (défaut: <nom>_llm.xlsx)")
|
||||
parser.add_argument("--dpi", type=int, default=300,
|
||||
help="Résolution OCR (défaut: 300)")
|
||||
parser.add_argument("--no-cache", action="store_true",
|
||||
help="Désactiver le cache texte OCR")
|
||||
parser.add_argument("--verbose", action="store_true",
|
||||
help="Afficher les prompts/réponses LLM")
|
||||
|
||||
args = parser.parse_args()
|
||||
|
||||
pdf_path = args.pdf
|
||||
if not Path(pdf_path).exists():
|
||||
print(f"[ERREUR] Fichier non trouvé : {pdf_path}")
|
||||
sys.exit(1)
|
||||
|
||||
output_path = args.output or str(Path(pdf_path).with_name(
|
||||
Path(pdf_path).stem + "_llm.xlsx"
|
||||
))
|
||||
|
||||
print(f"Fichier PDF : {pdf_path}")
|
||||
print(f"Modèle LLM : {args.model}")
|
||||
print(f"Sortie Excel : {output_path}")
|
||||
print()
|
||||
|
||||
# --- Étape 1 : OCR ---
|
||||
txt_cache = Path(pdf_path).with_suffix(".txt")
|
||||
if txt_cache.exists() and not args.no_cache:
|
||||
print("Étape 1/4 : Chargement du texte depuis le cache...")
|
||||
full_text = txt_cache.read_text(encoding="utf-8")
|
||||
full_text = normalize_text(full_text)
|
||||
print(f" {len(full_text)} caractères chargés depuis {txt_cache}")
|
||||
else:
|
||||
print("Étape 1/4 : OCR du document...")
|
||||
full_text = ocr_pdf(pdf_path, dpi=args.dpi)
|
||||
if not args.no_cache:
|
||||
txt_cache.write_text(full_text, encoding="utf-8")
|
||||
print(f" Cache texte sauvegardé : {txt_cache}")
|
||||
print(f" Longueur du texte : {len(full_text)} caractères")
|
||||
print()
|
||||
|
||||
# --- Étape 2 : Détection du type de document ---
|
||||
print("Étape 2/4 : Détection du type de document...")
|
||||
t0 = time.time()
|
||||
doc_info = detect_document_type(full_text, model=args.model, timeout=args.timeout, verbose=args.verbose)
|
||||
print(f" Type : {doc_info.get('type_document', '?')}")
|
||||
print(f" Organisme : {doc_info.get('organisme', '?')}")
|
||||
print(f" Objet : {doc_info.get('objet', '?')}")
|
||||
print(f" Séparateur: {doc_info.get('separateur_blocs', '(aucun)')}")
|
||||
print(f" Colonnes : {doc_info.get('colonnes_detectees', [])}")
|
||||
print(f" ({time.time() - t0:.1f}s)")
|
||||
print()
|
||||
|
||||
# --- Étape 3 : Découpage et extraction ---
|
||||
print("Étape 3/4 : Découpage en blocs et extraction LLM...")
|
||||
separator = doc_info.get("separateur_blocs", "")
|
||||
blocks = split_into_blocks(full_text, separator)
|
||||
print(f" {len(blocks)} blocs à traiter")
|
||||
|
||||
all_items = []
|
||||
t0 = time.time()
|
||||
for i, block in enumerate(blocks):
|
||||
print(f" Bloc {i+1}/{len(blocks)}...", end="\r")
|
||||
items = extract_block(block, doc_info, model=args.model, timeout=args.timeout, verbose=args.verbose)
|
||||
all_items.extend(items)
|
||||
# Progression
|
||||
elapsed = time.time() - t0
|
||||
avg = elapsed / (i + 1)
|
||||
remaining = avg * (len(blocks) - i - 1)
|
||||
print(f" Bloc {i+1}/{len(blocks)} → {len(items)} dossier(s) "
|
||||
f"[{elapsed:.0f}s écoulé, ~{remaining:.0f}s restant] ")
|
||||
|
||||
total_elapsed = time.time() - t0
|
||||
print(f" Extraction terminée : {len(all_items)} dossiers bruts en {total_elapsed:.0f}s")
|
||||
print()
|
||||
|
||||
# --- Étape 4 : Fusion et export ---
|
||||
print("Étape 4/4 : Fusion, dédoublonnage et export Excel...")
|
||||
rows = merge_and_deduplicate(all_items)
|
||||
print(f" {len(rows)} dossiers après dédoublonnage")
|
||||
|
||||
# Statistiques
|
||||
fav = sum(1 for r in rows if "Favorable" in r.get("Decision", "") and "Défavorable" not in r.get("Decision", ""))
|
||||
defav = sum(1 for r in rows if "Défavorable" in r.get("Decision", ""))
|
||||
mixte = sum(1 for r in rows if "Mixte" in r.get("Decision", ""))
|
||||
indet = sum(1 for r in rows if r.get("Decision", "") in ("Indéterminé", ""))
|
||||
print(f" Favorable établissement : {fav}")
|
||||
print(f" Défavorable établissement : {defav}")
|
||||
print(f" Mixte : {mixte}")
|
||||
print(f" Indéterminé : {indet}")
|
||||
|
||||
write_excel(rows, output_path)
|
||||
print()
|
||||
print("Terminé.")
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
@@ -1,690 +0,0 @@
|
||||
#!/usr/bin/env python3
|
||||
"""
|
||||
parse_decision_ucr.py — Extraction des décisions UCR depuis un PDF scanné (contrôle T2A)
|
||||
|
||||
Entrée : PDF scanné de décision UCR (CPAM / Assurance Maladie)
|
||||
Sortie : Fichier Excel (.xlsx) avec une feuille unique
|
||||
|
||||
Colonnes extraites (enrichies pour analyse IA) :
|
||||
Champ, OGC, Type_desaccord,
|
||||
Code_etablissement, Libelle_etablissement,
|
||||
Code_controleurs, Libelle_controleurs,
|
||||
Codes_retenus_final,
|
||||
Decision, Texte_decision_complet, Resume_motif,
|
||||
Regles_citees, References_guide,
|
||||
GHM_mentionne, GHS_mentionne, GHM_final, GHS_final,
|
||||
Impact_groupage
|
||||
"""
|
||||
from __future__ import annotations
|
||||
|
||||
import re
|
||||
import sys
|
||||
from pathlib import Path
|
||||
|
||||
import pymupdf
|
||||
import pytesseract
|
||||
from PIL import Image
|
||||
import io
|
||||
from openpyxl import Workbook
|
||||
from openpyxl.styles import Font, PatternFill, Alignment, Border, Side
|
||||
import unicodedata
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 0. Normalisation texte OCR
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
def normalize_text(text: str) -> str:
|
||||
"""Normalise les apostrophes, guillemets et espaces issus de l'OCR."""
|
||||
text = text.replace("\u2018", "'").replace("\u2019", "'")
|
||||
text = text.replace("\u201C", '"').replace("\u201D", '"')
|
||||
text = text.replace("\u00AB", '"').replace("\u00BB", '"')
|
||||
text = text.replace("''", "'")
|
||||
text = text.replace("\u00A0", " ").replace("\u202F", " ")
|
||||
# Erreurs OCR courantes
|
||||
text = re.sub(r"\bF'UCR\b", "l'UCR", text)
|
||||
text = re.sub(r"\bl''UCR\b", "l'UCR", text)
|
||||
return text
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 1. OCR
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
def ocr_pdf(pdf_path: str, dpi: int = 300) -> str:
|
||||
"""Extrait le texte de toutes les pages du PDF via Tesseract OCR."""
|
||||
doc = pymupdf.open(pdf_path)
|
||||
full_text = []
|
||||
total = len(doc)
|
||||
for i, page in enumerate(doc):
|
||||
print(f" OCR page {i+1}/{total}...", end="\r")
|
||||
mat = pymupdf.Matrix(dpi / 72, dpi / 72)
|
||||
pix = page.get_pixmap(matrix=mat)
|
||||
img = Image.open(io.BytesIO(pix.tobytes("png")))
|
||||
text = pytesseract.image_to_string(img, lang="fra")
|
||||
full_text.append(text)
|
||||
print(f" OCR terminé : {total} pages. ")
|
||||
return normalize_text("\n\n".join(full_text))
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 2. Parsing — Regex
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
RE_CHAMP = re.compile(
|
||||
r"Champ\s*(?:n°\s*)?(\d+)\s*[:\-—]?\s*(?:Séjours|:)",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
RE_OGC_HEADER = re.compile(
|
||||
r"(?:^|\n)\s*OGC\s+(\d+)\s*:",
|
||||
re.MULTILINE,
|
||||
)
|
||||
|
||||
RE_TYPE_DESACCORD = re.compile(
|
||||
r"(?:désaccord|discussion)\s+porte\s+(?:sur\s+)?(?:le\s+|les\s+)?(DP\s+et\s+(?:le\s+)?DAS|DP\s+et\s+DAS|DP|DAS)",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
RE_CIM10 = re.compile(r"\b([A-Z]\d{2}(?:\.\d{1,2})?)\b")
|
||||
|
||||
RE_CODAGE_ETS = re.compile(
|
||||
r"Codage\s+[ée]tablissement\s*:\s*(.*?)(?=Codage\s+contr[ôo]leurs)",
|
||||
re.IGNORECASE | re.DOTALL,
|
||||
)
|
||||
|
||||
RE_CODAGE_CTRL = re.compile(
|
||||
r"Codage\s+contr[ôo]leurs\s*:\s*(.*?)(?=D[EÉ]C[I1]?SION\s+UCR|PROPOSITION\s+UCR)",
|
||||
re.IGNORECASE | re.DOTALL,
|
||||
)
|
||||
|
||||
RE_DECISION = re.compile(
|
||||
r"(?:D[EÉ]C[I1]?SION|PROPOSITION)\s+UCR\s*:?\s*(.*)",
|
||||
re.IGNORECASE | re.DOTALL,
|
||||
)
|
||||
|
||||
# --- Classification ---
|
||||
|
||||
RE_FAVORABLE = re.compile(
|
||||
r"(?:"
|
||||
r"retient\s+(?:la\s+demande|le\s+codage|l'avis)\s+(?:de\s+)?l'[ée]tablissement"
|
||||
r"|retient\s+en\s+D[PA]S\s+le\s+code"
|
||||
r"|retient\s+le\s+codage\s+du\s+DP\s+de\s+l'[ée]tablissement"
|
||||
r"|l'UCR\s+retient\s+l'avis\s+de\s+l'[ée]tablissement"
|
||||
r"|confirme\s+l'avis\s+(?:de\s+)?l'[ée]tablissement"
|
||||
r")",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
RE_DEFAVORABLE = re.compile(
|
||||
r"confirme\s+l'avis\s+des\s+(?:m[ée]decins\s+)?contr[oô]leurs",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
RE_UCR_RETIENT = re.compile(r"l'UCR\s+retient\b", re.IGNORECASE)
|
||||
RE_UCR_PROPOSE = re.compile(r"l'UCR\s+propose\b", re.IGNORECASE)
|
||||
RE_NE_RETIENT_PAS = re.compile(r"ne\s+retient\s+pas", re.IGNORECASE)
|
||||
|
||||
# --- GHM / GHS ---
|
||||
|
||||
RE_GHM = re.compile(r"GHM\s+([A-Z0-9]{5,7})", re.IGNORECASE)
|
||||
RE_GHS = re.compile(r"GHS\s+(\d{3,5})", re.IGNORECASE)
|
||||
|
||||
RE_MIEUX_VALORISE = re.compile(r"mieux\s+valoris[ée]", re.IGNORECASE)
|
||||
RE_PAS_MODIFIE = re.compile(
|
||||
r"(?:ne\s+modifie\s+pas|ne\s+change(?:nt)?\s+pas|pas\s+de\s+changement|reste\s+group[ée])",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
# --- Règles et références ---
|
||||
|
||||
# Pages du guide méthodologique
|
||||
RE_GUIDE_PAGE = re.compile(
|
||||
r"(?:guide\s+m[ée]thodologique|guide)\s*(?:p\.?|page)\s*(\d{1,3})",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
RE_PAGE_GUIDE = re.compile(
|
||||
r"(?:p\.?|page)\s*(\d{1,3})\s+du\s+guide",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
# Règles T (T3, T7, etc.)
|
||||
RE_REGLE_T = re.compile(
|
||||
r"r[èe]gle\s+(T\d+)",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
# Fascicules ATIH
|
||||
RE_FASCICULE = re.compile(
|
||||
r"fascicule\s+(?:ATIH\s+)?(?:de\s+codage\s+)?(?:PMSI\s+)?(?:n°\s*)?(\d{1,2})?\s*(?:[-–]\s*)?([A-ZÀ-Üa-zà-ü\s]+?)(?:\s+(?:de\s+)?(\d{4}))?(?:\s*(?:,\s*)?(?:p\.?\s*|page\s*)(\d+))?",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
# Avis Agora
|
||||
RE_AVIS_AGORA = re.compile(
|
||||
r"avis\s+(?:agora|AGORA)\s*(?:n°\s*)?(\d+)",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
# Consignes de codage avec page
|
||||
RE_CONSIGNES_CODAGE = re.compile(
|
||||
r"consignes?\s+de\s+codage\s*(?:p\.?\s*|page\s*)(\d+)",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
# Codage retenu / DP retenu / DAS retenu
|
||||
RE_CODAGE_RETENU = re.compile(
|
||||
r"(?:codage\s+retenu|DP\s*(?:retenu|=)|DAS\s*(?:retenu|=)|code\s+retenu|est\s+cod[ée]\s+en|se\s+code)\s*(?:est\s+)?(?::?\s*)([A-Z]\d{2}(?:\.\d{1,2})?)",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
# "est ajouté en DAS" / "ajout du code X"
|
||||
RE_CODE_AJOUTE = re.compile(
|
||||
r"(?:est\s+ajout[ée]\s+en\s+D[PA]S|ajout(?:er)?\s+(?:du\s+|en\s+D[PA]S\s+(?:le\s+)?)?(?:code\s+)?)\s*(?::?\s*)([A-Z]\d{2}(?:\.\d{1,2})?)",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 2b. Fonctions d'extraction
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
def extract_codes_and_label(text: str) -> tuple[str, str]:
|
||||
"""Extrait les codes CIM-10 et le libellé depuis un bloc de codage."""
|
||||
codes = RE_CIM10.findall(text)
|
||||
labels = re.findall(r'[«"](.*?)[»"]', text)
|
||||
code_str = " + ".join(codes) if codes else ""
|
||||
label_str = " | ".join(labels) if labels else text.strip()[:120]
|
||||
label_str = re.sub(r"\s+", " ", label_str).strip()
|
||||
return code_str, label_str
|
||||
|
||||
|
||||
def extract_codes_retenus(decision_text: str) -> str:
|
||||
"""Extrait les codes finalement retenus par l'UCR."""
|
||||
codes = set()
|
||||
for m in RE_CODAGE_RETENU.finditer(decision_text):
|
||||
codes.add(m.group(1))
|
||||
for m in RE_CODE_AJOUTE.finditer(decision_text):
|
||||
codes.add(m.group(1))
|
||||
return " + ".join(sorted(codes)) if codes else ""
|
||||
|
||||
|
||||
def extract_regles(text: str) -> str:
|
||||
"""Extrait les règles de codage citées (T3, T7, etc.)."""
|
||||
regles = set()
|
||||
for m in RE_REGLE_T.finditer(text):
|
||||
regles.add(m.group(1).upper())
|
||||
return ", ".join(sorted(regles)) if regles else ""
|
||||
|
||||
|
||||
def extract_references(text: str) -> str:
|
||||
"""Extrait toutes les références (guide, fascicules, avis Agora, consignes)."""
|
||||
refs = []
|
||||
|
||||
# Pages du guide méthodologique
|
||||
pages_guide = set()
|
||||
for m in RE_GUIDE_PAGE.finditer(text):
|
||||
pages_guide.add(m.group(1))
|
||||
for m in RE_PAGE_GUIDE.finditer(text):
|
||||
pages_guide.add(m.group(1))
|
||||
if pages_guide:
|
||||
refs.append("Guide méthodologique p." + ", p.".join(sorted(pages_guide, key=int)))
|
||||
|
||||
# Fascicules ATIH
|
||||
for m in RE_FASCICULE.finditer(text):
|
||||
num = m.group(1) or ""
|
||||
sujet = (m.group(2) or "").strip()
|
||||
annee = m.group(3) or ""
|
||||
page = m.group(4) or ""
|
||||
ref = "Fascicule"
|
||||
if num:
|
||||
ref += f" {num}"
|
||||
if sujet:
|
||||
ref += f" {sujet}"
|
||||
if annee:
|
||||
ref += f" ({annee})"
|
||||
if page:
|
||||
ref += f" p.{page}"
|
||||
refs.append(ref.strip())
|
||||
|
||||
# Avis Agora
|
||||
for m in RE_AVIS_AGORA.finditer(text):
|
||||
refs.append(f"Avis Agora n°{m.group(1)}")
|
||||
|
||||
# Consignes de codage
|
||||
for m in RE_CONSIGNES_CODAGE.finditer(text):
|
||||
refs.append(f"Consignes de codage p.{m.group(1)}")
|
||||
|
||||
# Dédupliquer
|
||||
seen = set()
|
||||
unique = []
|
||||
for r in refs:
|
||||
r_lower = r.lower()
|
||||
if r_lower not in seen:
|
||||
seen.add(r_lower)
|
||||
unique.append(r)
|
||||
|
||||
return " ; ".join(unique) if unique else ""
|
||||
|
||||
|
||||
def extract_ghm_ghs_all(text: str) -> tuple[list[str], list[str]]:
|
||||
"""Extrait tous les GHM et GHS mentionnés."""
|
||||
ghms = []
|
||||
for m in RE_GHM.finditer(text):
|
||||
v = m.group(1).upper()
|
||||
if v not in ghms:
|
||||
ghms.append(v)
|
||||
ghss = []
|
||||
for m in RE_GHS.finditer(text):
|
||||
v = m.group(1)
|
||||
if v not in ghss:
|
||||
ghss.append(v)
|
||||
return ghms, ghss
|
||||
|
||||
|
||||
def classify_decision(decision_text: str) -> str:
|
||||
"""Classifie la décision : Favorable / Défavorable / Mixte / Indéterminé."""
|
||||
text = normalize_text(decision_text)
|
||||
|
||||
fav = bool(RE_FAVORABLE.search(text))
|
||||
defav = bool(RE_DEFAVORABLE.search(text))
|
||||
|
||||
ucr_retient = bool(RE_UCR_RETIENT.search(text))
|
||||
ucr_propose = bool(RE_UCR_PROPOSE.search(text))
|
||||
ne_retient_pas = bool(RE_NE_RETIENT_PAS.search(text))
|
||||
|
||||
if ucr_retient and not ne_retient_pas:
|
||||
fav = True
|
||||
if ucr_propose and not defav:
|
||||
fav = True
|
||||
|
||||
if (ucr_retient or fav) and defav:
|
||||
return "Mixte"
|
||||
if fav and defav:
|
||||
return "Mixte"
|
||||
elif fav:
|
||||
return "Favorable établissement"
|
||||
elif defav:
|
||||
return "Défavorable établissement"
|
||||
else:
|
||||
return "Indéterminé"
|
||||
|
||||
|
||||
def clean_decision_text(text: str) -> str:
|
||||
"""Nettoie le texte de décision (supprime artifacts OCR en fin de bloc)."""
|
||||
# Supprimer les lignes de pied de page UCR
|
||||
text = re.sub(r"\n\s*(?:UCR\s+NA|CONFIDENTIEL|Page\s+\d+).*$", "", text, flags=re.MULTILINE | re.IGNORECASE)
|
||||
# Supprimer les artefacts OCR de fin (séquences de caractères isolés)
|
||||
text = re.sub(r"\n\s*[A-Z]{1,4}\s*(?:—|—|-)\s*[a-zA-Z]{0,3}\s*$", "", text, flags=re.MULTILINE)
|
||||
text = re.sub(r"\n\s*(?:EE|ESS|2 ae|A D ES|EE nd)\s*$", "", text, flags=re.MULTILINE | re.IGNORECASE)
|
||||
# Normaliser les espaces
|
||||
text = re.sub(r"[ \t]+", " ", text)
|
||||
text = re.sub(r"\n{3,}", "\n\n", text)
|
||||
return text.strip()
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 2c. Parsing des blocs
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
def parse_ogc_block(block_text: str, champ: int, ogc_num: int) -> dict:
|
||||
"""Parse un bloc OGC et retourne un dictionnaire structuré enrichi."""
|
||||
result = {
|
||||
"Champ": champ,
|
||||
"OGC": ogc_num,
|
||||
"Type_desaccord": "",
|
||||
"Code_etablissement": "",
|
||||
"Libelle_etablissement": "",
|
||||
"Code_controleurs": "",
|
||||
"Libelle_controleurs": "",
|
||||
"Codes_retenus_final": "",
|
||||
"Decision": "",
|
||||
"Texte_decision_complet": "",
|
||||
"Resume_motif": "",
|
||||
"Regles_citees": "",
|
||||
"References_guide": "",
|
||||
"GHM_mentionne": "",
|
||||
"GHS_mentionne": "",
|
||||
"GHM_final": "",
|
||||
"GHS_final": "",
|
||||
"Impact_groupage": "",
|
||||
}
|
||||
|
||||
# Type de désaccord
|
||||
m = RE_TYPE_DESACCORD.search(block_text)
|
||||
if m:
|
||||
raw = m.group(1).upper().strip()
|
||||
raw = re.sub(r"\s+", " ", raw)
|
||||
if "DP" in raw and "DAS" in raw:
|
||||
result["Type_desaccord"] = "DP + DAS"
|
||||
elif "DAS" in raw:
|
||||
result["Type_desaccord"] = "DAS"
|
||||
elif "DP" in raw:
|
||||
result["Type_desaccord"] = "DP"
|
||||
|
||||
# Codage établissement
|
||||
m = RE_CODAGE_ETS.search(block_text)
|
||||
if m:
|
||||
raw_ets = m.group(1).strip()
|
||||
result["Code_etablissement"], result["Libelle_etablissement"] = extract_codes_and_label(raw_ets)
|
||||
|
||||
# Codage contrôleurs
|
||||
m = RE_CODAGE_CTRL.search(block_text)
|
||||
if m:
|
||||
raw_ctrl = m.group(1).strip()
|
||||
if re.search(r"non\s+repris", raw_ctrl, re.IGNORECASE):
|
||||
result["Code_controleurs"] = "non repris"
|
||||
result["Libelle_controleurs"] = ""
|
||||
else:
|
||||
result["Code_controleurs"], result["Libelle_controleurs"] = extract_codes_and_label(raw_ctrl)
|
||||
|
||||
# Décision UCR — TEXTE COMPLET
|
||||
m = RE_DECISION.search(block_text)
|
||||
if m:
|
||||
decision_text = m.group(1).strip()
|
||||
decision_clean = clean_decision_text(decision_text)
|
||||
|
||||
result["Decision"] = classify_decision(decision_clean)
|
||||
result["Texte_decision_complet"] = decision_clean
|
||||
|
||||
# Résumé court (première phrase significative)
|
||||
resume = re.sub(r"\s+", " ", decision_clean)[:300].strip()
|
||||
# Couper à la dernière phrase complète
|
||||
last_dot = resume.rfind(".")
|
||||
if last_dot > 100:
|
||||
resume = resume[:last_dot + 1]
|
||||
result["Resume_motif"] = resume
|
||||
|
||||
# Codes finalement retenus
|
||||
result["Codes_retenus_final"] = extract_codes_retenus(decision_clean)
|
||||
|
||||
# Règles citées (T3, T7, etc.)
|
||||
result["Regles_citees"] = extract_regles(block_text)
|
||||
|
||||
# Références (guide, fascicules, avis Agora)
|
||||
result["References_guide"] = extract_references(block_text)
|
||||
|
||||
# GHM / GHS — tous ceux mentionnés et le dernier (= final)
|
||||
ghms, ghss = extract_ghm_ghs_all(block_text)
|
||||
if ghms:
|
||||
result["GHM_mentionne"] = " / ".join(ghms)
|
||||
result["GHM_final"] = ghms[-1] # Le dernier mentionné est souvent le final
|
||||
if ghss:
|
||||
result["GHS_mentionne"] = " / ".join(ghss)
|
||||
result["GHS_final"] = ghss[-1]
|
||||
|
||||
# Impact groupage
|
||||
if RE_MIEUX_VALORISE.search(block_text):
|
||||
result["Impact_groupage"] = "Mieux valorisé"
|
||||
elif RE_PAS_MODIFIE.search(block_text):
|
||||
result["Impact_groupage"] = "Pas de changement"
|
||||
|
||||
return result
|
||||
|
||||
|
||||
def parse_grouped_ogcs(text_block: str, champ: int, ogc_nums: list[int]) -> list[dict]:
|
||||
"""Parse un bloc groupé (ex: OGC 14,19,46,50 traités ensemble)."""
|
||||
template = parse_ogc_block(text_block, champ, ogc_nums[0])
|
||||
results = []
|
||||
for num in ogc_nums:
|
||||
row = dict(template)
|
||||
row["OGC"] = num
|
||||
results.append(row)
|
||||
return results
|
||||
|
||||
|
||||
def parse_document(full_text: str) -> list[dict]:
|
||||
"""Parse le texte OCR complet et retourne la liste des dossiers."""
|
||||
rows = []
|
||||
|
||||
champ_positions = [(m.start(), int(m.group(1))) for m in RE_CHAMP.finditer(full_text)]
|
||||
ogc_positions = [(m.start(), int(m.group(1))) for m in RE_OGC_HEADER.finditer(full_text)]
|
||||
|
||||
def get_champ_for_position(pos: int) -> int:
|
||||
ch = 0
|
||||
for cp, cn in champ_positions:
|
||||
if cp <= pos:
|
||||
ch = cn
|
||||
else:
|
||||
break
|
||||
return ch
|
||||
|
||||
# Blocs groupés
|
||||
RE_GROUPED = re.compile(
|
||||
r"(?:Concernant|Pour)\s+les\s+OGC\s+([\d,\s]+)",
|
||||
re.IGNORECASE,
|
||||
)
|
||||
|
||||
grouped_ogcs = set()
|
||||
for m in RE_GROUPED.finditer(full_text):
|
||||
nums = [int(n.strip()) for n in m.group(1).split(",") if n.strip().isdigit()]
|
||||
if len(nums) > 1:
|
||||
start = m.start()
|
||||
end = len(full_text)
|
||||
for op, on in ogc_positions:
|
||||
if op > start + 50 and on not in nums:
|
||||
end = op
|
||||
break
|
||||
block = full_text[start:end]
|
||||
champ = get_champ_for_position(start)
|
||||
group_rows = parse_grouped_ogcs(block, champ, nums)
|
||||
rows.extend(group_rows)
|
||||
grouped_ogcs.update(nums)
|
||||
|
||||
# OGC individuels
|
||||
for idx, (pos, ogc_num) in enumerate(ogc_positions):
|
||||
champ = get_champ_for_position(pos)
|
||||
|
||||
end = len(full_text)
|
||||
for next_pos, _ in ogc_positions[idx + 1:]:
|
||||
if next_pos > pos + 20:
|
||||
end = next_pos
|
||||
break
|
||||
for cp, _ in champ_positions:
|
||||
if pos < cp < end:
|
||||
end = cp
|
||||
break
|
||||
|
||||
block = full_text[pos:end]
|
||||
row = parse_ogc_block(block, champ, ogc_num)
|
||||
|
||||
if ogc_num in grouped_ogcs:
|
||||
if row["Code_etablissement"] and row["Decision"]:
|
||||
rows = [r for r in rows if r["OGC"] != ogc_num]
|
||||
rows.append(row)
|
||||
else:
|
||||
if row["Code_etablissement"] or row["Decision"]:
|
||||
rows.append(row)
|
||||
|
||||
rows.sort(key=lambda r: (r["Champ"], r["OGC"]))
|
||||
|
||||
# Dédupliquer
|
||||
seen = {}
|
||||
deduped = []
|
||||
for r in rows:
|
||||
key = r["OGC"]
|
||||
if key in seen:
|
||||
old = seen[key]
|
||||
old_score = sum(1 for v in old.values() if v)
|
||||
new_score = sum(1 for v in r.values() if v)
|
||||
if new_score > old_score:
|
||||
deduped = [x for x in deduped if x["OGC"] != key]
|
||||
deduped.append(r)
|
||||
seen[key] = r
|
||||
else:
|
||||
seen[key] = r
|
||||
deduped.append(r)
|
||||
|
||||
deduped.sort(key=lambda r: (r["Champ"], r["OGC"]))
|
||||
return deduped
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# 3. Export Excel
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
HEADERS = [
|
||||
"Champ",
|
||||
"OGC",
|
||||
"Type_desaccord",
|
||||
"Code_etablissement",
|
||||
"Libelle_etablissement",
|
||||
"Code_controleurs",
|
||||
"Libelle_controleurs",
|
||||
"Codes_retenus_final",
|
||||
"Decision",
|
||||
"Texte_decision_complet",
|
||||
"Resume_motif",
|
||||
"Regles_citees",
|
||||
"References_guide",
|
||||
"GHM_mentionne",
|
||||
"GHS_mentionne",
|
||||
"GHM_final",
|
||||
"GHS_final",
|
||||
"Impact_groupage",
|
||||
]
|
||||
|
||||
HEADER_LABELS = [
|
||||
"Champ",
|
||||
"N° OGC",
|
||||
"Type désaccord",
|
||||
"Code(s) Établissement",
|
||||
"Libellé Établissement",
|
||||
"Code(s) Contrôleurs",
|
||||
"Libellé Contrôleurs",
|
||||
"Code(s) retenus (final)",
|
||||
"Décision UCR",
|
||||
"Texte décision complet",
|
||||
"Résumé du motif",
|
||||
"Règles codage citées",
|
||||
"Références (guide, fascicules, avis)",
|
||||
"GHM mentionné(s)",
|
||||
"GHS mentionné(s)",
|
||||
"GHM final",
|
||||
"GHS final",
|
||||
"Impact groupage",
|
||||
]
|
||||
|
||||
|
||||
def write_excel(rows: list[dict], output_path: str):
|
||||
"""Écrit les résultats dans un fichier Excel (feuille unique)."""
|
||||
wb = Workbook()
|
||||
ws = wb.active
|
||||
ws.title = "Décisions UCR"
|
||||
|
||||
# Styles
|
||||
header_font = Font(bold=True, color="FFFFFF", size=11)
|
||||
header_fill = PatternFill(start_color="2F5496", end_color="2F5496", fill_type="solid")
|
||||
header_align = Alignment(horizontal="center", vertical="center", wrap_text=True)
|
||||
thin_border = Border(
|
||||
left=Side(style="thin"),
|
||||
right=Side(style="thin"),
|
||||
top=Side(style="thin"),
|
||||
bottom=Side(style="thin"),
|
||||
)
|
||||
|
||||
fav_fill = PatternFill(start_color="C6EFCE", end_color="C6EFCE", fill_type="solid")
|
||||
defav_fill = PatternFill(start_color="FFC7CE", end_color="FFC7CE", fill_type="solid")
|
||||
mixte_fill = PatternFill(start_color="FFEB9C", end_color="FFEB9C", fill_type="solid")
|
||||
|
||||
# En-têtes
|
||||
for col, label in enumerate(HEADER_LABELS, 1):
|
||||
cell = ws.cell(row=1, column=col, value=label)
|
||||
cell.font = header_font
|
||||
cell.fill = header_fill
|
||||
cell.alignment = header_align
|
||||
cell.border = thin_border
|
||||
|
||||
# Données
|
||||
for row_idx, data in enumerate(rows, 2):
|
||||
for col_idx, key in enumerate(HEADERS, 1):
|
||||
val = data.get(key, "")
|
||||
cell = ws.cell(row=row_idx, column=col_idx, value=val)
|
||||
cell.border = thin_border
|
||||
cell.alignment = Alignment(vertical="top", wrap_text=True)
|
||||
|
||||
# Colorer la colonne Décision
|
||||
dec_col = HEADERS.index("Decision") + 1
|
||||
decision_cell = ws.cell(row=row_idx, column=dec_col)
|
||||
dv = str(decision_cell.value or "")
|
||||
if "Favorable" in dv and "Défavorable" not in dv:
|
||||
decision_cell.fill = fav_fill
|
||||
elif "Défavorable" in dv:
|
||||
decision_cell.fill = defav_fill
|
||||
elif "Mixte" in dv:
|
||||
decision_cell.fill = mixte_fill
|
||||
|
||||
# Largeurs de colonnes
|
||||
col_widths = {
|
||||
"Champ": 8, "OGC": 8, "Type_desaccord": 14,
|
||||
"Code_etablissement": 22, "Libelle_etablissement": 40,
|
||||
"Code_controleurs": 22, "Libelle_controleurs": 40,
|
||||
"Codes_retenus_final": 22,
|
||||
"Decision": 24, "Texte_decision_complet": 80,
|
||||
"Resume_motif": 60,
|
||||
"Regles_citees": 16, "References_guide": 50,
|
||||
"GHM_mentionne": 16, "GHS_mentionne": 16,
|
||||
"GHM_final": 12, "GHS_final": 10,
|
||||
"Impact_groupage": 20,
|
||||
}
|
||||
for i, key in enumerate(HEADERS, 1):
|
||||
ws.column_dimensions[ws.cell(row=1, column=i).column_letter].width = col_widths.get(key, 15)
|
||||
|
||||
# Filtre automatique
|
||||
last_col_letter = ws.cell(row=1, column=len(HEADERS)).column_letter
|
||||
ws.auto_filter.ref = f"A1:{last_col_letter}{len(rows)+1}"
|
||||
|
||||
# Figer la première ligne
|
||||
ws.freeze_panes = "A2"
|
||||
|
||||
wb.save(output_path)
|
||||
print(f"Excel enregistré : {output_path}")
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# Main
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
def main():
|
||||
if len(sys.argv) < 2:
|
||||
pdf_path = str(Path(__file__).parent / "SPHO-FINANC26020915121.pdf")
|
||||
else:
|
||||
pdf_path = sys.argv[1]
|
||||
|
||||
output_path = str(Path(pdf_path).with_suffix(".xlsx"))
|
||||
|
||||
print(f"Fichier PDF : {pdf_path}")
|
||||
print("Étape 1/3 : OCR du document...")
|
||||
full_text = ocr_pdf(pdf_path)
|
||||
|
||||
txt_path = str(Path(pdf_path).with_suffix(".txt"))
|
||||
Path(txt_path).write_text(full_text, encoding="utf-8")
|
||||
print(f" Texte brut sauvegardé : {txt_path}")
|
||||
|
||||
print("Étape 2/3 : Extraction des décisions...")
|
||||
rows = parse_document(full_text)
|
||||
print(f" {len(rows)} dossiers OGC extraits.")
|
||||
|
||||
fav = sum(1 for r in rows if "Favorable" in r.get("Decision", "") and "Défavorable" not in r.get("Decision", ""))
|
||||
defav = sum(1 for r in rows if "Défavorable" in r.get("Decision", ""))
|
||||
mixte = sum(1 for r in rows if "Mixte" in r.get("Decision", ""))
|
||||
indet = sum(1 for r in rows if r.get("Decision", "") in ("Indéterminé", ""))
|
||||
refs_count = sum(1 for r in rows if r.get("References_guide"))
|
||||
codes_ret = sum(1 for r in rows if r.get("Codes_retenus_final"))
|
||||
regles = sum(1 for r in rows if r.get("Regles_citees"))
|
||||
|
||||
print(f" Favorable établissement : {fav}")
|
||||
print(f" Défavorable établissement : {defav}")
|
||||
print(f" Mixte : {mixte}")
|
||||
print(f" Indéterminé : {indet}")
|
||||
print(f" Avec références citées : {refs_count}")
|
||||
print(f" Avec codes retenus : {codes_ret}")
|
||||
print(f" Avec règles T : {regles}")
|
||||
|
||||
print("Étape 3/3 : Génération du fichier Excel...")
|
||||
write_excel(rows, output_path)
|
||||
print("Terminé.")
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
36336
data/ollama_cache.backup_benchmark.json
Normal file
36336
data/ollama_cache.backup_benchmark.json
Normal file
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38638
data/ollama_cache.json
38638
data/ollama_cache.json
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Load Diff
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131157
data/rag_index/metadata.json
131157
data/rag_index/metadata.json
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Load Diff
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Load Diff
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|
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|
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|
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|
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|
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|
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||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
test content
|
||||
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|
||||
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|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
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|
||||
test content
|
||||
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|
||||
test content
|
||||
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|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
@@ -1 +0,0 @@
|
||||
test content
|
||||
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user