fix: corrections retours collaborateurs — FP médicaments, N° venue, taille PDF
- Fix critique: whole-word search dans redact_pdf_raster et redact_pdf_vector pour éviter le substring matching (ex: "Luc" dans "FLUCONAZOLE", "TATIN" dans "ATORVASTATINE"). Appliqué à tous les kinds nom/NER. - Ajout regex RE_VENUE_SEJOUR pour N° venue / N° séjour (BACTERIO, Trackare) - DDN multiline élargi: tolère 0-3 lignes entre label DDN et date (tableaux BACTERIO) - N° venue multiline: détection dans tableaux BACTERIO interleaved - Réduction taille PDF raster: 150 DPI + JPEG quality 85 (était 300 DPI PNG) Ratio moyen: 19.5x (était 30-50x) - Score qualité maintenu: 97.0/100 (grade A), 0 régression Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
This commit is contained in:
@@ -912,6 +912,12 @@ RE_EPISODE = re.compile(
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r"[ÉéEe]pisode\s*N[o°.]?\s*\.?\s*:?\s*(\d{5,})",
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r"[ÉéEe]pisode\s*N[o°.]?\s*\.?\s*:?\s*(\d{5,})",
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re.IGNORECASE,
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re.IGNORECASE,
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)
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)
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# N° venue (BACTERIO), N° séjour — identifiants de séjour hospitalier
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RE_VENUE_SEJOUR = re.compile(
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r"(?:N[°o]?\s*venue|N[°o]?\s*séjour|N[°o]?\s*de\s+séjour"
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r"|num[ée]ro\s+de\s+(?:venue|séjour))\s*[:\-]?\s*(\d{4,})",
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re.IGNORECASE,
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)
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@dataclass
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@dataclass
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class PiiHit:
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class PiiHit:
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@@ -1302,6 +1308,14 @@ def _mask_line_by_regex(line: str, audit: List[PiiHit], page_idx: int, cfg: Dict
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return full[:full.find(val)] + PLACEHOLDERS["EPISODE"]
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return full[:full.find(val)] + PLACEHOLDERS["EPISODE"]
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line = RE_EPISODE.sub(_repl_episode, line)
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line = RE_EPISODE.sub(_repl_episode, line)
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# N° venue / N° séjour (BACTERIO, Trackare)
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def _repl_venue(m: re.Match) -> str:
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audit.append(PiiHit(page_idx, "NDA", m.group(0), PLACEHOLDERS["NDA"]))
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full = m.group(0)
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val = m.group(1)
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return full[:full.find(val)] + PLACEHOLDERS["NDA"]
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line = RE_VENUE_SEJOUR.sub(_repl_venue, line)
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# Établissements de santé (EHPAD Bayonne, SSR La Concha, Hôpital de Bayonne, etc.)
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# Établissements de santé (EHPAD Bayonne, SSR La Concha, Hôpital de Bayonne, etc.)
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def _repl_etab(m: re.Match) -> str:
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def _repl_etab(m: re.Match) -> str:
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audit.append(PiiHit(page_idx, "ETAB", m.group(0), PLACEHOLDERS["ETAB"]))
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audit.append(PiiHit(page_idx, "ETAB", m.group(0), PLACEHOLDERS["ETAB"]))
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@@ -1988,8 +2002,10 @@ def anonymise_document_regex(pages_text: List[str], tables_lines: List[List[str]
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# Phase 0d : date de naissance multiline (label et date sur lignes séparées)
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# Phase 0d : date de naissance multiline (label et date sur lignes séparées)
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# Ex: "Né(e) le :\n07/04/1943" ou "Date de naissance\n01/02/1950"
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# Ex: "Né(e) le :\n07/04/1943" ou "Date de naissance\n01/02/1950"
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# Variante large : tolère 0-3 lignes intermédiaires (tableaux BACTERIO)
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_RE_DATE_NAISSANCE_MULTILINE = re.compile(
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_RE_DATE_NAISSANCE_MULTILINE = re.compile(
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r"(?:\bn[ée]+(?:\(?e?\)?)?\s+le|date\s+de\s+naissance|DDN)\s*[:\-]?\s*\n\s*"
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r"(?:\bn[ée]+(?:\(?e?\)?)?\s+le|date\s+de\s+naissance|DDN)\s*[:\-]?\s*\n"
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r"(?:[^\n]*\n){0,3}\s*"
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r"(\d{1,2}[/.\-]\d{1,2}[/.\-]\d{2,4})",
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r"(\d{1,2}[/.\-]\d{1,2}[/.\-]\d{2,4})",
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re.IGNORECASE,
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re.IGNORECASE,
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)
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)
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@@ -2012,6 +2028,14 @@ def anonymise_document_regex(pages_text: List[str], tables_lines: List[List[str]
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for m in _RE_DEMANDE_MULTILINE.finditer(full_raw):
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for m in _RE_DEMANDE_MULTILINE.finditer(full_raw):
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audit.append(PiiHit(-1, "DOSSIER", m.group(1), PLACEHOLDERS["DOSSIER"]))
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audit.append(PiiHit(-1, "DOSSIER", m.group(1), PLACEHOLDERS["DOSSIER"]))
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# Phase 0g : N° venue multiline (tableaux BACTERIO : label et valeur séparés)
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_RE_VENUE_MULTILINE = re.compile(
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r"N[°o]?\s*venue\s*[:\-]?\s*\n(?:[^\n]*\n){0,2}\s*(\d{6,})",
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re.IGNORECASE,
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)
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for m in _RE_VENUE_MULTILINE.finditer(full_raw):
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audit.append(PiiHit(-1, "NDA", m.group(1), PLACEHOLDERS["NDA"]))
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# Phase 1 : masquage ligne par ligne (regex classiques)
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# Phase 1 : masquage ligne par ligne (regex classiques)
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out_pages: List[str] = []
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out_pages: List[str] = []
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for i, page_txt in enumerate(pages_text):
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for i, page_txt in enumerate(pages_text):
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@@ -2609,6 +2633,8 @@ def selective_rescan(text: str, cfg: Dict[str, Any] | None = None) -> str:
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protected = RE_CODE_POSTAL.sub(PLACEHOLDERS["CODE_POSTAL"], protected)
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protected = RE_CODE_POSTAL.sub(PLACEHOLDERS["CODE_POSTAL"], protected)
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# N° Episode
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# N° Episode
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protected = RE_EPISODE.sub(PLACEHOLDERS["EPISODE"], protected)
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protected = RE_EPISODE.sub(PLACEHOLDERS["EPISODE"], protected)
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# N° venue / séjour
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protected = RE_VENUE_SEJOUR.sub(PLACEHOLDERS["NDA"], protected)
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# N° RPPS
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# N° RPPS
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protected = RE_RPPS.sub(PLACEHOLDERS["RPPS"], protected)
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protected = RE_RPPS.sub(PLACEHOLDERS["RPPS"], protected)
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# FINESS par gazetteer (nombres 9 chiffres matchant un vrai numéro FINESS)
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# FINESS par gazetteer (nombres 9 chiffres matchant un vrai numéro FINESS)
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@@ -2740,14 +2766,28 @@ def _search_ocr_words(ocr_words: List[Tuple[str, float, float, float, float]], t
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def _search_whole_word(page, token: str) -> list:
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def _search_whole_word(page, token: str) -> list:
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"""Cherche un token comme mot entier (pas substring) via get_text('words').
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"""Cherche un token comme mot entier (pas substring) via get_text('words').
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Évite les faux positifs de page.search_for() qui fait du substring matching."""
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Évite les faux positifs de page.search_for() qui fait du substring matching.
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Gère les noms composés (JEAN-PIERRE) qui peuvent être splittés par le PDF."""
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rects = []
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rects = []
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token_lower = token.lower().strip()
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token_lower = token.lower().strip()
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for w in page.get_text("words"):
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words = page.get_text("words")
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for w in words:
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# w = (x0, y0, x1, y1, word, block_no, line_no, word_no)
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# w = (x0, y0, x1, y1, word, block_no, line_no, word_no)
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word_text = w[4].strip(".,;:!?()[]{}\"'«»-–—/\\")
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word_text = w[4].strip(".,;:!?()[]{}\"'«»-–—/\\")
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if word_text.lower() == token_lower:
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if word_text.lower() == token_lower:
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rects.append(fitz.Rect(w[0], w[1], w[2], w[3]))
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rects.append(fitz.Rect(w[0], w[1], w[2], w[3]))
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# Fallback pour noms composés avec tiret (JEAN-PIERRE) splittés par le PDF
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if not rects and "-" in token:
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parts = [p for p in token.split("-") if p]
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if len(parts) >= 2:
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for p in parts:
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p_lower = p.lower().strip()
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if len(p_lower) < 2:
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continue
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for w in words:
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wt = w[4].strip(".,;:!?()[]{}\"'«»-–—/\\")
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if wt.lower() == p_lower:
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rects.append(fitz.Rect(w[0], w[1], w[2], w[3]))
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return rects
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return rects
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def redact_pdf_vector(original_pdf: Path, audit: List[PiiHit], out_pdf: Path, ocr_word_map: OcrWordMap = None) -> None:
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def redact_pdf_vector(original_pdf: Path, audit: List[PiiHit], out_pdf: Path, ocr_word_map: OcrWordMap = None) -> None:
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@@ -2761,9 +2801,10 @@ def redact_pdf_vector(original_pdf: Path, audit: List[PiiHit], out_pdf: Path, oc
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# Kinds à ne pas chercher dans le PDF (dates masquées uniquement dans le texte,
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# Kinds à ne pas chercher dans le PDF (dates masquées uniquement dans le texte,
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# pas dans le PDF où elles rendent les tableaux illisibles)
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# pas dans le PDF où elles rendent les tableaux illisibles)
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_VECTOR_SKIP_KINDS = {"EDS_DATE", "EDS_DATE_NAISSANCE", "EDS_SECU", "EDS_TEL"}
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_VECTOR_SKIP_KINDS = {"EDS_DATE", "EDS_DATE_NAISSANCE", "EDS_SECU", "EDS_TEL"}
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# Kinds dont les tokens courts (< 5) risquent le substring matching via page.search_for()
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# Kinds sensibles au substring matching : utiliser _search_whole_word
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_VECTOR_SHORT_TOKEN_KINDS = {"NOM_GLOBAL", "NOM_EXTRACTED", "EDS_NOM", "EDS_PRENOM",
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_VECTOR_WHOLEWORD_KINDS = {"NOM_GLOBAL", "NOM_EXTRACTED", "EDS_NOM", "EDS_PRENOM",
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"EDS_HOPITAL", "EDS_VILLE", "ETAB", "ETAB_GLOBAL"}
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"EDS_HOPITAL", "EDS_VILLE", "ETAB", "ETAB_GLOBAL",
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"NER_PER", "NER_ORG", "NER_LOC"}
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for pno in range(len(doc)):
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for pno in range(len(doc)):
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page = doc[pno]
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page = doc[pno]
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hits = by_page.get(pno, []) + by_page.get(-1, [])
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hits = by_page.get(pno, []) + by_page.get(-1, [])
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@@ -2783,26 +2824,33 @@ def redact_pdf_vector(original_pdf: Path, audit: List[PiiHit], out_pdf: Path, oc
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if dedup_key in seen_tokens:
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if dedup_key in seen_tokens:
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continue
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continue
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seen_tokens.add(dedup_key)
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seen_tokens.add(dedup_key)
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if h.kind in _VECTOR_SHORT_TOKEN_KINDS and len(token) < 5:
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# --- Kinds de type nom/entité : whole-word search pour éviter le
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if token.lower() not in _MEDICAL_STOP_WORDS_SET:
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# substring matching (ex: "TATIN" dans "ATORVASTATINE") ---
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if h.kind in _VECTOR_WHOLEWORD_KINDS:
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if token.lower() in _MEDICAL_STOP_WORDS_SET:
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continue
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if " " not in token:
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rects = _search_whole_word(page, token)
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rects = _search_whole_word(page, token)
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if not rects and ocr_word_map and pno in ocr_word_map:
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if not rects and ocr_word_map and pno in ocr_word_map:
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rects = _search_ocr_words(ocr_word_map[pno], token, page.rect)
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rects = _search_ocr_words(ocr_word_map[pno], token, page.rect)
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all_rects.extend(rects)
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all_rects.extend(rects)
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else:
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rects = page.search_for(token)
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if not rects:
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for word in token.split():
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word = word.strip(" .-'")
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if len(word) < 3 or word.lower() in _MEDICAL_STOP_WORDS_SET:
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continue
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rects.extend(_search_whole_word(page, word))
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if not rects and ocr_word_map and pno in ocr_word_map:
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rects.extend(_search_ocr_words(ocr_word_map[pno], word, page.rect))
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all_rects.extend(rects)
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continue
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continue
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rects = page.search_for(token)
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rects = page.search_for(token)
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if not rects and h.kind in {"NIR", "IBAN", "TEL"}:
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if not rects and h.kind in {"NIR", "IBAN", "TEL"}:
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compact = re.sub(r"\s+", "", token)
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compact = re.sub(r"\s+", "", token)
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if compact != token:
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if compact != token:
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rects = page.search_for(compact)
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rects = page.search_for(compact)
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if not rects and " " in token and h.kind in {"NOM", "NOM_GLOBAL", "NOM_EXTRACTED", "NER_PER", "EDS_NOM"}:
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for word in token.split():
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word = word.strip(" .-'")
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if len(word) < 5 or word.lower() in _MEDICAL_STOP_WORDS_SET:
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continue
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if not word[0].isupper():
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continue
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rects.extend(page.search_for(word))
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if not rects and ocr_word_map and pno in ocr_word_map:
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if not rects and ocr_word_map and pno in ocr_word_map:
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rects = _search_ocr_words(ocr_word_map[pno], token, page.rect)
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rects = _search_ocr_words(ocr_word_map[pno], token, page.rect)
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all_rects.extend(rects)
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all_rects.extend(rects)
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@@ -2819,7 +2867,7 @@ def redact_pdf_vector(original_pdf: Path, audit: List[PiiHit], out_pdf: Path, oc
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def _rasterize_page(args):
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def _rasterize_page(args):
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"""Worker parallèle : rasterise une page + dessine les rectangles noirs."""
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"""Worker parallèle : rasterise une page + dessine les rectangles noirs."""
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pdf_path_str, pno, rects_tuples, dpi, ogc_label = args
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pdf_path_str, pno, rects_tuples, dpi, ogc_label, jpeg_quality = args
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doc = fitz.open(pdf_path_str)
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doc = fitz.open(pdf_path_str)
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src = doc[pno]
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src = doc[pno]
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rect_w, rect_h = src.rect.width, src.rect.height
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rect_w, rect_h = src.rect.width, src.rect.height
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@@ -2851,19 +2899,24 @@ def _rasterize_page(args):
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draw.rectangle([x - 4, y - 2, x + tw + 4, y + th + 2], fill=(255, 255, 255))
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draw.rectangle([x - 4, y - 2, x + tw + 4, y + th + 2], fill=(255, 255, 255))
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draw.text((x, y), text, fill=(0, 0, 0), font=font)
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draw.text((x, y), text, fill=(0, 0, 0), font=font)
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buf = io.BytesIO()
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buf = io.BytesIO()
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if jpeg_quality and jpeg_quality > 0:
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img.save(buf, format="JPEG", quality=jpeg_quality, optimize=True)
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else:
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img.save(buf, format="PNG")
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img.save(buf, format="PNG")
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doc.close()
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doc.close()
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return pno, buf.getvalue(), rect_w, rect_h
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return pno, buf.getvalue(), rect_w, rect_h
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def redact_pdf_raster(original_pdf: Path, audit: List[PiiHit], out_pdf: Path, dpi: int = 300, ogc_label: Optional[str] = None, ocr_word_map: OcrWordMap = None) -> None:
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def redact_pdf_raster(original_pdf: Path, audit: List[PiiHit], out_pdf: Path, dpi: int = 150, ogc_label: Optional[str] = None, ocr_word_map: OcrWordMap = None, jpeg_quality: int = 85) -> None:
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if fitz is None:
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if fitz is None:
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raise RuntimeError("PyMuPDF non disponible – installez pymupdf.")
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raise RuntimeError("PyMuPDF non disponible – installez pymupdf.")
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doc = fitz.open(str(original_pdf))
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doc = fitz.open(str(original_pdf))
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all_rects: Dict[int, List["fitz.Rect"]] = {}
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all_rects: Dict[int, List["fitz.Rect"]] = {}
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_RASTER_SKIP_KINDS = {"EDS_DATE", "EDS_DATE_NAISSANCE", "EDS_SECU", "EDS_TEL"}
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_RASTER_SKIP_KINDS = {"EDS_DATE", "EDS_DATE_NAISSANCE", "EDS_SECU", "EDS_TEL"}
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_RASTER_SHORT_TOKEN_KINDS = {"NOM_GLOBAL", "NOM_EXTRACTED", "EDS_NOM", "EDS_PRENOM",
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# Kinds sensibles au substring matching : utiliser _search_whole_word
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"EDS_HOPITAL", "EDS_VILLE", "ETAB", "ETAB_GLOBAL"}
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_RASTER_WHOLEWORD_KINDS = {"NOM_GLOBAL", "NOM_EXTRACTED", "EDS_NOM", "EDS_PRENOM",
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"EDS_HOPITAL", "EDS_VILLE", "ETAB", "ETAB_GLOBAL",
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"NER_PER", "NER_ORG", "NER_LOC"}
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_VLM_NUMERIC_KINDS = {"VLM_NUM_PATIENT", "VLM_NUM_LOT", "VLM_NUM_ORD", "VLM_NDA",
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_VLM_NUMERIC_KINDS = {"VLM_NUM_PATIENT", "VLM_NUM_LOT", "VLM_NUM_ORD", "VLM_NDA",
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"VLM_NIR", "VLM_IPP", "VLM_RPPS"}
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"VLM_NIR", "VLM_IPP", "VLM_RPPS"}
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by_page: Dict[int, List[PiiHit]] = {}
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by_page: Dict[int, List[PiiHit]] = {}
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@@ -2887,12 +2940,30 @@ def redact_pdf_raster(original_pdf: Path, audit: List[PiiHit], out_pdf: Path, dp
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if token in seen_tokens:
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if token in seen_tokens:
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continue
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continue
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seen_tokens.add(token)
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seen_tokens.add(token)
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if h.kind in _RASTER_SHORT_TOKEN_KINDS and len(token) < 5:
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# --- Kinds de type nom/entité : whole-word search pour éviter le
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if token.lower() not in _MEDICAL_STOP_WORDS_SET:
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# substring matching (ex: "TATIN" dans "ATORVASTATINE") ---
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found_short = _search_whole_word(page, token)
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if h.kind in _RASTER_WHOLEWORD_KINDS:
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if not found_short and ocr_word_map and pno in ocr_word_map:
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if token.lower() in _MEDICAL_STOP_WORDS_SET:
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found_short = _search_ocr_words(ocr_word_map[pno], token, page.rect)
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continue
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rects.extend(found_short)
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if " " not in token:
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# Token mono-mot : chercher comme mot entier
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found_ww = _search_whole_word(page, token)
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if not found_ww and ocr_word_map and pno in ocr_word_map:
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found_ww = _search_ocr_words(ocr_word_map[pno], token, page.rect)
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rects.extend(found_ww)
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else:
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# Token multi-mots : d'abord chercher la chaîne complète
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||||||
|
found_multi = page.search_for(token)
|
||||||
|
if not found_multi:
|
||||||
|
# Fallback : chercher chaque mot comme mot entier
|
||||||
|
for word in token.split():
|
||||||
|
word = word.strip(" .-'")
|
||||||
|
if len(word) < 3 or word.lower() in _MEDICAL_STOP_WORDS_SET:
|
||||||
|
continue
|
||||||
|
found_multi.extend(_search_whole_word(page, word))
|
||||||
|
if not found_multi and ocr_word_map and pno in ocr_word_map:
|
||||||
|
found_multi.extend(_search_ocr_words(ocr_word_map[pno], word, page.rect))
|
||||||
|
rects.extend(found_multi)
|
||||||
continue
|
continue
|
||||||
found = page.search_for(token)
|
found = page.search_for(token)
|
||||||
if not found and h.kind in {"NIR", "IBAN", "TEL", "VLM_TEL", "VLM_NIR"}:
|
if not found and h.kind in {"NIR", "IBAN", "TEL", "VLM_TEL", "VLM_NIR"}:
|
||||||
@@ -2926,7 +2997,7 @@ def redact_pdf_raster(original_pdf: Path, audit: List[PiiHit], out_pdf: Path, dp
|
|||||||
|
|
||||||
n_workers = min(n_pages, os.cpu_count() or 4)
|
n_workers = min(n_pages, os.cpu_count() or 4)
|
||||||
tasks = [
|
tasks = [
|
||||||
(str(original_pdf), pno, rects_as_tuples.get(pno, []), dpi, ogc_label)
|
(str(original_pdf), pno, rects_as_tuples.get(pno, []), dpi, ogc_label, jpeg_quality)
|
||||||
for pno in range(n_pages)
|
for pno in range(n_pages)
|
||||||
]
|
]
|
||||||
|
|
||||||
@@ -2935,9 +3006,9 @@ def redact_pdf_raster(original_pdf: Path, audit: List[PiiHit], out_pdf: Path, dp
|
|||||||
|
|
||||||
# Assemblage final (séquentiel, rapide)
|
# Assemblage final (séquentiel, rapide)
|
||||||
out = fitz.open()
|
out = fitz.open()
|
||||||
for pno, png_bytes, w, h in results:
|
for pno, img_bytes, w, h in results:
|
||||||
dst = out.new_page(width=w, height=h)
|
dst = out.new_page(width=w, height=h)
|
||||||
dst.insert_image(fitz.Rect(0, 0, w, h), stream=png_bytes)
|
dst.insert_image(fitz.Rect(0, 0, w, h), stream=img_bytes)
|
||||||
out.save(str(out_pdf), deflate=True, garbage=4, clean=True)
|
out.save(str(out_pdf), deflate=True, garbage=4, clean=True)
|
||||||
out.close()
|
out.close()
|
||||||
|
|
||||||
|
|||||||
@@ -1,18 +1,18 @@
|
|||||||
{
|
{
|
||||||
"date": "2026-03-11T12:11:24.286697",
|
"date": "2026-03-12T10:24:59.261417",
|
||||||
"scores": {
|
"scores": {
|
||||||
"global_score": 97.0,
|
"global_score": 97.0,
|
||||||
"leak_score": 100.0,
|
"leak_score": 100.0,
|
||||||
"fp_score": 90,
|
"fp_score": 90,
|
||||||
"totals": {
|
"totals": {
|
||||||
"documents": 29,
|
"documents": 29,
|
||||||
"audit_hits": 2804,
|
"audit_hits": 2797,
|
||||||
"name_tokens_known": 461,
|
"name_tokens_known": 461,
|
||||||
"leak_audit": 0,
|
"leak_audit": 0,
|
||||||
"leak_occurrences": 0,
|
"leak_occurrences": 0,
|
||||||
"leak_regex": 0,
|
"leak_regex": 0,
|
||||||
"leak_insee_high": 0,
|
"leak_insee_high": 0,
|
||||||
"leak_insee_medium": 568,
|
"leak_insee_medium": 569,
|
||||||
"fp_medical": 0,
|
"fp_medical": 0,
|
||||||
"fp_overmasking": 2
|
"fp_overmasking": 2
|
||||||
}
|
}
|
||||||
@@ -158,7 +158,7 @@
|
|||||||
"leak_audit": 0,
|
"leak_audit": 0,
|
||||||
"leak_regex": 0,
|
"leak_regex": 0,
|
||||||
"leak_insee_high": 0,
|
"leak_insee_high": 0,
|
||||||
"leak_insee_medium": 18,
|
"leak_insee_medium": 19,
|
||||||
"fp_medical": 0,
|
"fp_medical": 0,
|
||||||
"fp_overmasking": 0
|
"fp_overmasking": 0
|
||||||
},
|
},
|
||||||
|
|||||||
Reference in New Issue
Block a user