59 lines
1.6 KiB
Python
59 lines
1.6 KiB
Python
"""FastAPI application for OMOP Pipeline."""
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from fastapi import FastAPI, WebSocket, WebSocketDisconnect
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from fastapi.middleware.cors import CORSMiddleware
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from contextlib import asynccontextmanager
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import logging
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from .routers import etl, schema, stats, logs, validation
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from ..utils.config import Config
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logger = logging.getLogger(__name__)
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@asynccontextmanager
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async def lifespan(app: FastAPI):
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"""Application lifespan manager."""
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logger.info("Starting OMOP Pipeline API")
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yield
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logger.info("Shutting down OMOP Pipeline API")
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app = FastAPI(
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title="OMOP Pipeline API",
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description="API for managing OMOP CDM 5.4 ETL pipeline",
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version="1.0.0",
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lifespan=lifespan
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)
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# CORS middleware
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app.add_middleware(
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CORSMiddleware,
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allow_origins=["http://localhost:4400", "http://localhost:3000", "http://localhost:5173"],
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allow_credentials=True,
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allow_methods=["*"],
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allow_headers=["*"],
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)
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# Include routers
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app.include_router(etl.router, prefix="/api/etl", tags=["ETL"])
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app.include_router(schema.router, prefix="/api/schema", tags=["Schema"])
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app.include_router(stats.router, prefix="/api/stats", tags=["Statistics"])
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app.include_router(logs.router, prefix="/api/logs", tags=["Logs"])
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app.include_router(validation.router, prefix="/api/validation", tags=["Validation"])
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@app.get("/")
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async def root():
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"""Root endpoint."""
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return {
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"message": "OMOP Pipeline API",
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"version": "1.0.0",
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"docs": "/docs"
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}
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@app.get("/health")
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async def health():
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"""Health check endpoint."""
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return {"status": "healthy"}
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