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aivanov_CIM/TASK_4_SUMMARY.md
2026-03-05 01:20:14 +01:00

6.1 KiB

Task 4 Summary: Référentiels Manager Implementation

Completed: Subtask 4.1

What was implemented:

  1. ReferentielsManager Class (src/pipeline_mco_pmsi/rag/referentiels_manager.py)

    • __init__(): Initializes manager with data directory and embedding model configuration
    • import_referentiel(): Imports PDF files, generates SHA-256 hash, extracts text
    • get_version_info(): Retrieves version information for a referentiel type
    • _extract_text_from_pdf(): Extracts text from PDF files using pypdf
    • chunk_referentiel(): Delegates to specific chunking methods
    • chunk_guide_mco(): Basic chunking for Guide Méthodologique MCO
    • chunk_cim10(): Basic chunking for CIM-10 FR
    • chunk_ccam(): Basic chunking for CCAM descriptive
    • build_index(): Placeholder (to be implemented in subtask 4.3)
  2. Data Models

    • Chunk: Represents a chunk of referentiel with metadata
    • VectorIndex: Represents a vector index with metadata
    • Uses existing ReferentielVersion from models.metadata
  3. Unit Tests (tests/test_referentiels_manager.py)

    • 15 tests covering all implemented functionality
    • All tests passing
    • Test coverage: 79% for referentiels_manager.py

Key Features:

  • SHA-256 Hashing: Every imported referentiel gets a unique hash for versioning
  • Text Extraction: Robust PDF text extraction with error handling
  • Version Caching: Imported versions are cached for quick retrieval
  • Flexible Chunking: Different chunking strategies for each referentiel type
  • Error Handling: Comprehensive error handling with logging

Requirements Satisfied:

  • Exigence 3.1: Maintenir des copies versionnées du référentiel CIM-10 PMSI avec hash et date d'import
  • Exigence 3.2: Maintenir des copies versionnées du référentiel CCAM PMSI avec hash et date d'import
  • Exigence 3.3: Maintenir des copies versionnées du guide MCO avec hash et date d'import
  • Exigence 13.1: Générer un hash lors de l'ingestion de nouveaux fichiers de référentiel

Remaining: Subtask 4.2

To be implemented:

  1. Intelligent Chunking for Guide MCO

    • Parse chapter/section structure
    • Preserve complete rules (règles d'exclusion, hiérarchisation)
    • Extract eligibility criteria for DP/DAS
    • Target: 500-1000 tokens per chunk with 100 token overlap
  2. Intelligent Chunking for CIM-10

    • Parse code blocks with inclusion/exclusion notes
    • Separate vectorization for alphabetical indexes vs analytical codes
    • Maintain natural language ↔ code links (e.g., "Gastrite" → "K29.7")
    • Target: 300-600 tokens per chunk
  3. Intelligent Chunking for CCAM

    • Parse acts with ATIH extensions (7+3 character codes)
    • Preserve technical notes and application conditions
    • Vectorize alphabetical indexes for natural language search
    • Target: 400-800 tokens per chunk

Requirements to satisfy:

  • Exigence 23.2: Chunker le Guide Méthodologique MCO en sections logiques préservant le contexte des règles
  • Exigence 23.3: Chunker la CIM-10 FR en préservant les notes d'inclusion/exclusion et blocs
  • Exigence 23.4: Chunker la CCAM descriptive en préservant les extensions ATIH et notes techniques

Remaining: Subtask 4.3

To be implemented:

  1. Embedding Model Integration

    • Load French medical embedding model (CamemBERT-bio or DrBERT)
    • Configure sentence-transformers
    • Generate embeddings for chunks (768 dimensions)
    • L2 normalization for cosine similarity
  2. FAISS Index Creation

    • Build HNSW (Hierarchical Navigable Small World) index
    • Configure index parameters (M, efConstruction)
    • Store index to disk
    • Generate index hash for versioning
  3. Alphabetical Index Vectorization

    • Separate vectorization for alphabetical indexes
    • Maintain bidirectional links (terms ↔ codes)
    • Enable natural language search

Requirements to satisfy:

  • Exigence 23.1: Implémenter une architecture RAG pour la recherche dans les référentiels
  • Exigence 23.5: Vectoriser les index alphabétiques en plus des codes analytiques
  • Exigence 27.1: Vectoriser les index alphabétiques CIM-10 et CCAM

Optional Subtasks

Subtask 4.4 (Optional): Property Tests

Property tests to implement:

  • Propriété 8: Pour tout référentiel, il doit avoir version, hash, et date d'import
  • Propriété 36: Pour tout import, un hash SHA-256 doit être généré
  • Propriété 46: Pour tout chunk, le contexte doit être préservé

Subtask 4.5 (Optional): Unit Tests for Chunking

Additional unit tests:

  • Test preservation of CIM-10 inclusion/exclusion notes
  • Test preservation of CCAM ATIH extensions
  • Test chunk size constraints
  • Test overlap behavior

Files Created/Modified

Created:

  • src/pipeline_mco_pmsi/rag/referentiels_manager.py (477 lines)
  • src/pipeline_mco_pmsi/rag/__init__.py
  • tests/test_referentiels_manager.py (260 lines)

Modified:

  • None (all new files)

Next Steps

  1. Implement Subtask 4.2: Intelligent chunking with structure preservation

    • Parse PDF structure more intelligently
    • Implement rule/note detection
    • Preserve semantic context
  2. Implement Subtask 4.3: Vectorization and indexation

    • Integrate sentence-transformers
    • Build FAISS HNSW index
    • Implement alphabetical index vectorization
  3. Test with Real PDFs: Verify chunking quality with actual ATIH documents

    • guide_methodo_mco_2026_version_provisoire.pdf
    • cim-10-fr_2026_a_usage_pmsi_version_provisoire_111225.pdf
    • actualisation_ccam_descriptive_a_usage_pmsi_v4_2025.pdf
  4. Optional: Implement property-based tests for robustness

Notes

  • The current chunking implementation is basic (paragraph-based) and will need to be enhanced in subtask 4.2
  • The placeholder hash ("0" * 64) for index_hash is used until the index is actually built in subtask 4.3
  • All PDF files are available in the workspace root for testing
  • The implementation follows the design document specifications closely